Items where Author is "Harrison, Andrew P"

Article

Wang, Jingjing and Meng, Xianwen and Yuan, Chunhui and Harrison, Andrew P and Chen, Ming (2016) The roles of cross-talk epigenetic patterns in<i>Arabidopsis thaliana</i>. Briefings in Functional Genomics, 15 (4). pp. 278-287. DOI https://doi.org/10.1093/bfgp/elv025

Corpas, Manuel and Valdivia-Granda, Willy and Torres, Nazareth and Greshake, Bastian and Coletta, Alain and Knaus, Alexej and Harrison, Andrew P and Cariaso, Mike and Moran, Federico and Nielsen, Fiona and Swan, Daniel and Weiss Solís, David Y and Krawitz, Peter and Schacherer, Frank and Schols, Peter and Yang, Huangming and Borry, Pascal and Glusman, Gustavo and Robinson, Peter N (2015) Crowdsourced direct-to-consumer genomic analysis of a family quartet. BMC Genomics, 16 (1). 910-. DOI https://doi.org/10.1186/s12864-015-1973-7

Shanahan, Hugh P and Owen, Anne M and Harrison, Andrew P (2014) Bioinformatics on the Cloud Computing Platform Azure. PLoS ONE, 9 (7). e102642-e102642. DOI https://doi.org/10.1371/journal.pone.0102642

Chen, Dijun and Fu, Liang-Yu and Zhang, Zhao and Li, Guoliang and Zhang, Hang and Jiang, Li and Harrison, Andrew P and Shanahan, Hugh P and Klukas, Christian and Zhang, Hong-Yu and Ruan, Yijun and Chen, Ling-Ling and Chen, Ming (2014) Dissecting the chromatin interactome of microRNA genes. Nucleic Acids Research, 42 (5). pp. 3028-3043. DOI https://doi.org/10.1093/nar/gkt1294

Musa, Ibrahim K and Walker, Stuart D and Owen, Anne M and Harrison, Andrew P (2014) Self-service infrastructure container for data intensive application. Journal of Cloud Computing: Advances, Systems and Applications, 3 (1). p. 5. DOI https://doi.org/10.1186/2192-113x-3-5

Upton, Graham JG and Harrison, Andrew P (2012) Motif effects in Affymetrix GeneChips seriously affect probe intensities. Nucleic Acids Research, 40 (19). pp. 9705-9716. DOI https://doi.org/10.1093/nar/gks717

Shanahan, Hugh P and Memon, Farhat N and Upton, Graham JG and Harrison, Andrew P (2012) Normalized Affymetrix expression data are biased by G-quadruplex formation. Nucleic Acids Research, 40 (8). pp. 3307-3315. DOI https://doi.org/10.1093/nar/gkr1230

Upton, Graham JG and Harrison, Andrew P (2010) The Detection of Blur in Affymetrix GeneChips. Statistical Applications in Genetics and Molecular Biology, 9 (1). Article37-. DOI https://doi.org/10.2202/1544-6115.1590

Memon, Farhat Naureen and Upton, Graham JG and Harrison, Andrew P (2010) A Comparative Study of the Impact of G‐Stack Probes on Various Affymetrix GeneChips of Mammalia. Journal of Nucleic Acids, 2010 (1). pp. 1-6. DOI https://doi.org/10.4061/2010/489736

Upton, Graham JG and Langdon, William B and Harrison, Andrew P (2008) G-spots cause incorrect expression measurement in Affymetrix microarrays. BMC Genomics, 9 (1). 613-. DOI https://doi.org/10.1186/1471-2164-9-613

Harrison, Andrew P and Rowsell, Joanna and Camargo, Renata da Silva and Langdon, William B and Stalteri, Maria and Upton, Graham JG and Arteaga-Salas, Jose M (2008) The use of Affymetrix GeneChips as a tool for studying alternative forms of RNA. Biochemical Society Transactions, 36 (3). pp. 511-513. DOI https://doi.org/10.1042/bst0360511

Arteaga-Salas, Jose Manuel and Harrison, Andrew P and Upton, Graham JG (2008) Reducing Spatial Flaws in Oligonucleotide Arrays by Using Neighborhood Information. Statistical Applications in Genetics and Molecular Biology, 7 (1). Article29-. DOI https://doi.org/10.2202/1544-6115.1383

Harrison, Andrew P and Johnston, Caroline E and Orengo, Christine A (2007) Establishing a major cause of discrepancy in the calibration of Affymetrix GeneChips. BMC Bioinformatics, 8 (1). 195-. DOI https://doi.org/10.1186/1471-2105-8-195

Stalteri, Maria A and Harrison, Andrew P (2007) Interpretation of multiple probe sets mapping to the same gene in Affymetrix GeneChips. BMC Bioinformatics, 8 (1). 13-. DOI https://doi.org/10.1186/1471-2105-8-13

Conference or Workshop Item

Langdon, William B and Harrison, Andrew P (2008) Evolving Regular Expressions for GeneChip Probe Performance Prediction. In: UNSPECIFIED, ? - ?.