Browse by Journal

Wang, Yucheng and Hannon, Eilis and Grant, Olivia and Gorrie-Stone, Tyler and Kumari, Meena and Mill, Jonathan and Zhai, Xiaojun and McDonald-Maier, Klaus and Schalkwyk, Leonard (2021) DNA methylation-based sex classifier to predictsex and identify sex chromosome aneuploidy. BMC Genomics, 22 (1). 484-. DOI https://doi.org/10.1186/s12864-021-07675-2

Mansell, Georgina and Gorrie-Stone, Tyler J and Bao, Yanchun and Kumari, Meena and Schalkwyk, Leonard S and Mill, Jonathan and Hannon, Eilis (2019) Guidance for DNA methylation studies: statistical insights from the Illumina EPIC array. BMC Genomics, 20 (1). 366-. DOI https://doi.org/10.1186/s12864-019-5761-7

Vainshtein, Yevhen and Rippe, Karsten and Teif, Vladimir B (2017) NucTools: analysis of chromatin feature occupancy profiles from high-throughput sequencing data. BMC Genomics, 18 (1). 158-. DOI https://doi.org/10.1186/s12864-017-3580-2

Spiers, H and Hannon, E and Schalkwyk, LC and Bray, NJ and Mill, J (2017) 5-hydroxymethylcytosine is highly dynamic across human fetal brain development. BMC Genomics, 18 (1). 738-. DOI https://doi.org/10.1186/s12864-017-4091-x

Osei-Amponsah, Richard and Skinner, Benjamin M and Adjei, Dennis O and Bauer, Julien and Larson, Greger and Affara, Nabeel A and Sargent, Carole A (2017) Origin and phylogenetic status of the local Ashanti Dwarf pig (ADP) of Ghana based on genetic analysis. BMC Genomics, 18 (1). 193-. DOI https://doi.org/10.1186/s12864-017-3536-6

Corpas, Manuel and Valdivia-Granda, Willy and Torres, Nazareth and Greshake, Bastian and Coletta, Alain and Knaus, Alexej and Harrison, Andrew P and Cariaso, Mike and Moran, Federico and Nielsen, Fiona and Swan, Daniel and Weiss Solís, David Y and Krawitz, Peter and Schacherer, Frank and Schols, Peter and Yang, Huangming and Borry, Pascal and Glusman, Gustavo and Robinson, Peter N (2015) Crowdsourced direct-to-consumer genomic analysis of a family quartet. BMC Genomics, 16 (1). 910-. DOI https://doi.org/10.1186/s12864-015-1973-7

Malki, Karim and Mineur, Yann S and Tosto, Maria Grazia and Campbell, James and Karia, Priya and Jumabhoy, Irfan and Sluyter, Frans and Crusio, Wim E and Schalkwyk, Leonard C (2015) Pervasive and opposing effects of Unpredictable Chronic Mild Stress (UCMS) on hippocampal gene expression in BALB/cJ and C57BL/6J mouse strains. BMC Genomics, 16 (1). 262-. DOI https://doi.org/10.1186/s12864-015-1431-6

Yates, Steven A and Swain, Martin T and Hegarty, Matthew J and Chernukin, Igor and Lowe, Matthew and Allison, Gordon G and Ruttink, Tom and Abberton, Michael T and Jenkins, Glyn and Skøt, Leif (2014) De novo assembly of red clover transcriptome based on RNA-Seq data provides insight into drought response, gene discovery and marker identification. BMC Genomics, 15 (1). p. 453. DOI https://doi.org/10.1186/1471-2164-15-453

Pidsley, R and Wong, CCY and Volta, M and Lunnon, K and Mill, J and Schalkwyk, LC (2013) A data-driven approach to preprocessing Illumina 450K methylation array data. BMC Genomics, 14 (1). 293-. DOI https://doi.org/10.1186/1471-2164-14-293

Parsons, MJ and Grimm, C and Paya-Cano, J and Fernandes, C and Liu, L and Philip, VM and Chesler, EJ and Nietfeld, W and Lehrach, H and Schalkwyk, LC (2012) Genetic variation in hippocampal microRNA expression differences in C57BL/6 J X DBA/2 J (BXD) recombinant inbred mouse strains. BMC Genomics, 13 (1). 476-. DOI https://doi.org/10.1186/1471-2164-13-476

Upton, Graham JG and Langdon, William B and Harrison, Andrew P (2008) G-spots cause incorrect expression measurement in Affymetrix microarrays. BMC Genomics, 9 (1). 613-. DOI https://doi.org/10.1186/1471-2164-9-613

Marco, Antonio and Marín, Ignacio (2008) How Athila retrotransposons survive in the Arabidopsis genome. BMC Genomics, 9 (1). p. 219. DOI https://doi.org/10.1186/1471-2164-9-219

Docherty, SJ and Butcher, LM and Schalkwyk, LC and Plomin, R (2007) Applicability of DNA pools on 500 KSNP microarrays for cost-effective initial screens in genomewide association studies. BMC Genomics, 8 (1). p. 214. DOI https://doi.org/10.1186/1471-2164-8-214

Meaburn, EL and Butcher, LM and Liu, L and Fernandes, C and Hansen, V and Al-Chalabi, A and Plomin, R and Craig, IW and Schalkwyk, LC (2005) Genotyping DNA pools on microarrays: Tackling the QTL problem of large samples and large numbers of SNPs. BMC Genomics, 6 (1). creators-Schalkwyk=3ALeonard_C=3A=3A. DOI https://doi.org/10.1186/1471-2164-6-52