Browse by Journal

Wolfe, Jareth C and Mikheeva, Liudmila A and Hagras, Hani and Zabet, Nicolae Radu (2021) An explainable artificial intelligence approach for decoding the enhancer histone modifications code and identification of novel enhancers in Drosophila. Genome Biology, 22 (1). 308-. DOI https://doi.org/10.1186/s13059-021-02532-7

Kazakevych, Juri and Denizot, Jérémy and Liebert, Anke and Portovedo, Mariana and Mosavie, Mia and Jain, Payal and Stellato, Claudia and Fraser, Claire and Corrêa, Renan Oliveira and Célestine, Marina and Mattiuz, Raphaël and Okkenhaug, Hanneke and Miller, J Ross and Vinolo, Marco Aurélio Ramirez and Veldhoen, Marc and Varga Weisz, Patrick (2020) Smarcad1 mediates microbiota-induced inflammation in mouse and coordinates gene expression in the intestinal epithelium. Genome Biology, 21 (1). 64-. DOI https://doi.org/10.1186/s13059-020-01976-7

El Khoury, Louis Y and Gorrie-Stone, Tyler J and Smart, Melissa and Hughes, Amanda and Bao, Yanchun and Andrayas, Alexandria and Burrage, Joe and Hannon, Eilis and Kumari, Meena and Mill, Jonathan and Schalkwyk, Leonard (2019) Systematic under-estimation of the epigenetic clock and age acceleration in older subjects. Genome Biology, 20 (1). 283-. DOI https://doi.org/10.1186/s13059-019-1810-4

Bell, Christopher G and Lowe, Robert and Adams, Peter D and Baccarelli, Andrea A and Beck, Stephan and Bell, Jordana T and Christensen, Brock C and Gladyshev, Vadim N and Heijmans, Bastiaan T and Horvath, Steve and Ideker, Trey and Issa, Jean-Pierre J and Kelsey, Karl T and Marioni, Riccardo E and Reik, Wolf and Relton, Caroline L and Schalkwyk, Leonard C and Teschendorff, Andrew E and Wagner, Wolfgang and Zhang, Kang and Rakyan, Vardhman K (2019) DNA methylation aging clocks: challenges and recommendations. Genome Biology, 20 (1). 249-. DOI https://doi.org/10.1186/s13059-019-1824-y

O’Brien, Heath E and Hannon, Eilis and Hill, Matthew J and Toste, Carolina C and Robertson, Matthew J and Morgan, Joanne E and McLaughlin, Gemma and Lewis, Cathryn M and Schalkwyk, Leonard C and Hall, Lynsey S and Pardiñas, Antonio F and Owen, Michael J and O’Donovan, Michael C and Mill, Jonathan and Bray, Nicholas J (2018) Expression quantitative trait loci in the developing human brain and their enrichment in neuropsychiatric disorders. Genome Biology, 19 (1). 194-. DOI https://doi.org/10.1186/s13059-018-1567-1

Koohy, H and Bolland, DJ and Matheson, LS and Schoenfelder, S and Stellato, C and Dimond, A and Várnai, C and Chovanec, P and Chessa, T and Denizot, J and Garcia, RM and Wingett, SW and Freire-Pritchett, P and Nagano, T and Hawkins, P and Stephens, L and Elderkin, S and Spivakov, M and Fraser, P and Corcoran, AE and Varga-Weisz, PD (2018) Genome organization and chromatin analysis identify transcriptional downregulation of insulin-like growth factor signaling as a hallmark of aging in developing B cells. Genome Biology, 19 (1). 126-. DOI https://doi.org/10.1186/s13059-018-1489-y

Lunnon, Katie and Hannon, Eilis and Smith, Rebecca G and Dempster, Emma and Wong, Chloe and Burrage, Joe and Troakes, Claire and Al-Sarraj, Safa and Kepa, Agnieszka and Schalkwyk, Leonard and Mill, Jonathan (2016) Variation in 5-hydroxymethylcytosine across human cortex and cerebellum. Genome Biology, 17 (1). 27-. DOI https://doi.org/10.1186/s13059-016-0871-x

Hannon, Eilis and Dempster, Emma and Viana, Joana and Burrage, Joe and Smith, Adam R and Macdonald, Ruby and St Clair, David and Mustard, Colette and Breen, Gerome and Therman, Sebastian and Kaprio, Jaakko and Toulopoulou, Timothea and Pol, Hilleke E Hulshoff and Bohlken, Marc M and Kahn, Rene S and Nenadic, Igor and Hultman, Christina M and Murray, Robin M and Collier, David A and Bass, Nick and Gurling, Hugh and McQuillin, Andrew and Schalkwyk, Leonard and Mill, Jonathan (2016) An integrated genetic-epigenetic analysis of schizophrenia: evidence for co-localization of genetic associations and differential DNA methylation. Genome Biology, 17 (1). 176-. DOI https://doi.org/10.1186/s13059-016-1041-x

Malecki, Michal and Bitton, Danny A and Rodríguez-López, Maria and Rallis, Charalampos and Calavia, Noelia Garcia and Smith, Graeme C and Bähler, Jürg (2016) Functional and regulatory profiling of energy metabolism in fission yeast. Genome Biology, 17 (1). 240-. DOI https://doi.org/10.1186/s13059-016-1101-2

Pidsley, R and Viana, J and Hannon, E and Spiers, HH and Troakes, C and Al-Saraj, S and Mechawar, N and Turecki, G and Schalkwyk, LC and Bray, NJ and Mill, J (2014) Methylomic profiling of human brain tissue supports a neurodevelopmental origin for schizophrenia. Genome Biology, 15 (10). creators-Schalkwyk=3ALeonard_C=3A=3A. DOI https://doi.org/10.1186/s13059-014-0483-2

Davies, MN and Volta, M and Pidsley, R and Lunnon, K and Dixit, A and Lovestone, S and Coarfa, C and Harris, RA and Milosavljevic, A and Troakes, C and Al-Sarraj, S and Dobson, R and Schalkwyk, LC and Mill, J (2012) Functional annotation of the human brain methylome identifies tissue-specific epigenetic variation across brain and blood. Genome Biology, 13 (6). R43-. DOI https://doi.org/10.1186/gb-2012-13-6-r43

Převorovský, Martin and Rallis, Charalampos (2011) Bright days for yeast research. Genome Biology, 12 (5). p. 305. DOI https://doi.org/10.1186/gb-2011-12-5-305

Rallis, Charalampos (2009) New tricks for an old-favorite model. Genome Biology, 10 (9). p. 315. DOI https://doi.org/10.1186/gb-2009-10-9-315

Hanisch, Anja and Vezzaro, Annalisa and Rallis, Charalampos (2008) Elucidating developmental gene networks. Genome Biology, 9 (6). p. 310. DOI https://doi.org/10.1186/gb-2008-9-6-310

Bazigou, Eleni and Rallis, Charalampos (2007) Cell signaling and cancer. Genome Biology, 8 (7). p. 310. DOI https://doi.org/10.1186/gb-2007-8-7-310

Rallis, Charalampos (2007) Chickens get their place in the sun. Genome Biology, 8 (5). p. 306. DOI https://doi.org/10.1186/gb-2007-8-5-306

Rallis, Charalampos (2006) Developmental genomics reaches new heights. Genome Biology, 7 (10). p. 329. DOI https://doi.org/10.1186/gb-2006-7-10-329