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Clark, Dave R and McKew, Boyd A and Binley, Andrew and Heppell, Catherine M and Whitby, Corinne and Trimmer, Mark (2022) Hydrological properties predict the composition of microbial communities cycling methane and nitrogen in rivers. ISME Communications, 2 (1). 5-. DOI https://doi.org/10.1038/s43705-022-00087-7

McKew, Boyd A and Johnson, Richard and Clothier, Lindsay and Skeels, Karl and Ross, Matthew S and Metodiev, Metodi and Frenzel, Max and Gieg, Lisa M and Martin, Jonathan W and Hough, Michael A and Whitby, Corinne (2021) Differential protein expression during growth on model and commercial mixtures of naphthenic acids in Pseudomonas fluorescens Pf‐5. MicrobiologyOpen, 10 (4). e1196-. DOI https://doi.org/10.1002/mbo3.1196

Ferguson, Robert MW and O'Gorman, Eoin J and McElroy, David J and McKew, Boyd A and Coleman, Ross A and Emmerson, Mark C and Dumbrell, Alex J (2021) The Ecological Impacts of Multiple Environmental Stressors on Coastal Biofilm Bacteria. Global Change Biology, 27 (13). pp. 3166-3178. DOI https://doi.org/10.1111/gcb.15626

Huby, Tom JC and Clark, Dave R and McKew, Boyd A and McGenity, Terry J (2021) Extremely Halophilic Archaeal Communities are Resilient to Short‐Term Entombment in Halite. Environmental Microbiology, 23 (7). pp. 3370-3383. DOI https://doi.org/10.1111/1462-2920.14913

Thomas, Gareth E and Brant, Jan L and Campo, Pablo and Clark, Dave R and Coulon, Frederic and Gregson, Benjamin H and McGenity, Terry J and McKew, Boyd A (2021) Effects of Dispersants and Biosurfactants on Crude-Oil Biodegradation and Bacterial Community Succession. Microorganisms, 9 (6). p. 1200. DOI https://doi.org/10.3390/microorganisms9061200

Uttarotai, Toungporn and McKew, Boyd A and Benyahia, Farid and Murrell, J Colin and Mhuantong, Wuttichai and Wangkarn, Sunanta and Chitov, Thararat and Bovonsombut, Sakunnee and McGenity, Terry J (2021) Isoprene-Degrading Bacteria from Soils Associated with Tropical Economic Crops and Framework Forest Trees. Microorganisms, 9 (5). p. 1024. DOI https://doi.org/10.3390/microorganisms9051024

Thomas, Gareth E and Bolam, Stefan G and Brant, Jan L and Brash, Rodney and Goodsir, Freya and Hynes, Clare and McGenity, Terry J and McIlwaine, Paul SO and McKew, Boyd A (2021) Evaluation of Polycyclic Aromatic Hydrocarbon Pollution From the HMS Royal Oak Shipwreck and Effects on Sediment Microbial Community Structure. Frontiers in Marine Science, 8. DOI https://doi.org/10.3389/fmars.2021.650139

McGenity, Terry J and McKew, Boyd A and Lea-Smith, David J (2021) Cryptic microbial hydrocarbon cycling. Nature Microbiology, 6 (4). pp. 419-420. DOI https://doi.org/10.1038/s41564-021-00881-4

Gregson, Benjamin H and McKew, Boyd A and Holland, Robert D and Nedwed, Timothy J and Prince, Roger C and McGenity, Terry J (2021) Marine Oil Snow, a Microbial Perspective. Frontiers in Marine Science, 8. DOI https://doi.org/10.3389/fmars.2021.619484

Thomas, Gareth E and Cameron, Tom C and Campo, Pablo and Clark, Dave R and Coulon, Frederic and Gregson, Benjamin H and Hepburn, Leanne J and McGenity, Terry J and Miliou, Anastasia and Whitby, Corinne and McKew, Boyd A (2020) Bacterial Community Legacy Effects Following the Agia Zoni II Oil-Spill, Greece. Frontiers in Microbiology, 11. 1706-. DOI https://doi.org/10.3389/fmicb.2020.01706

Gregson, Benjamin H and Metodieva, Gergana and Metodiev, Metodi V and Golyshin, Peter N and McKew, Boyd A (2020) Protein expression in the obligate hydrocarbon‐degrading psychrophile Oleispira antarctica RB‐8 during alkane degradation and cold tolerance. Environmental Microbiology, 22 (5). pp. 1870-1883. DOI https://doi.org/10.1111/1462-2920.14956

Clark, Dave R and McKew, Boyd A and Dong, Liang F and Leung, Garwai and Dumbrell, Alex J and Stott, Andrew and Grant, Helen and Nedwell, David B and Trimmer, Mark and Whitby, Corinne (2020) Mineralization and nitrification: Archaea dominate ammonia-oxidising communities in grassland soils. Soil Biology and Biochemistry, 143. p. 107725. DOI https://doi.org/10.1016/j.soilbio.2020.107725

Freeman, D and Bajón Fernández, Y and Wilson, A and McKew, BA and Whitby, C and Clark, DR and Jefferson, B and Coulon, F and Hassard, F (2020) Nitrogen oxidation consortia dynamics influence the performance of full-scale rotating biological contactors. Environment International, 135. p. 105354. DOI https://doi.org/10.1016/j.envint.2019.105354

Gregson, Benjamin H and Metodieva, Gergana and Metodiev, Metodi V and McKew, Boyd A (2019) Differential protein expression during growth on linear versus branched alkanes in the obligate marine hydrocarbon‐degrading bacterium Alcanivorax borkumensis SK2T. Environmental Microbiology, 21 (7). pp. 2347-2359. DOI https://doi.org/10.1111/1462-2920.14620

Gregson, Benjamin H and Metodieva, Gergana and Metodiev, Metodi V and Golyshin, Peter N and McKew, Boyd A (2018) Differential Protein Expression During Growth on Medium Versus Long-Chain Alkanes in the Obligate Marine Hydrocarbon-Degrading Bacterium Thalassolituus oleivorans MIL-1. Frontiers in Microbiology, 9. 3130-. DOI https://doi.org/10.3389/fmicb.2018.03130

Thompson, Murray SA and Bankier, Claire and Bell, Thomas and Dumbrell, Alex J and Gray, Clare and Ledger, Mark E and Lehmann, Katja and McKew, Boyd A and Sayer, Carl D and Shelley, Felicity and Trimmer, Mark and Warren, Scott L and Woodward, Guy (2016) Gene‐to‐ecosystem impacts of a catastrophic pesticide spill: testing a multilevel bioassessment approach in a river ecosystem. Freshwater Biology, 61 (12). pp. 2037-2050. DOI https://doi.org/10.1111/fwb.12676

Tatti, Enrico and McKew, Boyd A and Whitby, Corrine and Smith, Cindy J (2016) Simultaneous DNA-RNA Extraction from Coastal Sediments and Quantification of 16S rRNA Genes and Transcripts by Real-time PCR. Journal of Visualized Experiments, 2016 (112). DOI https://doi.org/10.3791/54067

Lansdown, K and McKew, BA and Whitby, C and Heppell, CM and Dumbrell, AJ and Binley, A and Olde, L and Trimmer, M (2016) Importance and controls of anaerobic ammonium oxidation influenced by riverbed geology. Nature Geoscience, 9 (5). pp. 357-360. DOI https://doi.org/10.1038/ngeo2684

McKew, Boyd A and Metodieva, Gergana and Raines, Christine A and Metodiev, Metodi V and Geider, Richard J (2015) Acclimation of <scp>E</scp>miliania huxleyi (1516) to nutrient limitation involves precise modification of the proteome to scavenge alternative sources of <scp>N</scp> and <scp>P</scp>. Environmental Microbiology, 17 (10). pp. 4050-4062. DOI https://doi.org/10.1111/1462-2920.12957

Li, Jialin and Nedwell, David B and Beddow, Jessica and Dumbrell, Alex J and McKew, Boyd A and Thorpe, Emma L and Whitby, Corinne (2015) amoA Gene Abundances and Nitrification Potential Rates Suggest that Benthic Ammonia-Oxidizing Bacteria and Not Archaea Dominate N Cycling in the Colne Estuary, United Kingdom. Applied and Environmental Microbiology, 81 (1). pp. 159-165. DOI https://doi.org/10.1128/aem.02654-14

Beddow, Jessica and Stölpe, Björn and Cole, Paula A and Lead, Jamie R and Sapp, Melanie and Lyons, Brett P and McKew, Boyd and Steinke, Michael and Benyahia, Farid and Colbeck, Ian and Whitby, Corinne (2014) Estuarine sediment hydrocarbon-degrading microbial communities demonstrate resilience to nanosilver. International Biodeterioration and Biodegradation, 96. pp. 206-215. DOI https://doi.org/10.1016/j.ibiod.2014.09.004

Mckew, BA and Lefebvre, SC and Achterberg, EP and Metodieva, G and Raines, CA and Metodiev, MV and Geider, RJ (2013) Plasticity in the proteome of Emiliania huxleyi CCMP 1516 to extremes of light is highly targeted. New Phytologist, 200 (1). pp. 61-73. DOI https://doi.org/10.1111/nph.12352

McKew, Boyd A and Davey, Phillip and Finch, Stewart J and Hopkins, Jason and Lefebvre, Stephane C and Metodiev, Metodi V and Oxborough, Kevin and Raines, Christine A and Lawson, Tracy and Geider, Richard J (2013) The trade‐off between the light‐harvesting and photoprotective functions of fucoxanthin‐chlorophyll proteins dominates light acclimation in Emiliania huxleyi (clone <scp>CCMP</scp> 1516). New Phytologist, 200 (1). pp. 74-85. DOI https://doi.org/10.1111/nph.12373

McKew, Boyd A and Dumbrell, Alex J and Taylor, Joe D and McGenity, Terry J and Underwood, Graham JC (2013) Differences between aerobic and anaerobic degradation of microphytobenthic biofilm-derived organic matter within intertidal sediments. FEMS Microbiology Ecology, 84 (3). pp. 495-509. DOI https://doi.org/10.1111/1574-6941.12077

Chronopoulou, Panagiota‐Myrsini and Fahy, Anne and Coulon, Frédéric and Païssé, Sandrine and Goñi‐Urriza, Marisol and Peperzak, Louis and Acuña Alvarez, Laura and McKew, Boyd A and Lawson, Tracy and Timmis, Kenneth N and Duran, Robert and Underwood, Graham JC and McGenity, Terry J (2013) Impact of a simulated oil spill on benthic phototrophs and nitrogen‐fixing bacteria in mudflat mesocosms. Environmental Microbiology, 15 (1). pp. 242-252. DOI https://doi.org/10.1111/j.1462-2920.2012.02864.x

Taylor, JD and McKew, BA and Kuhl, A and McGenity, TJ and Underwood, GJC (2013) Microphytobenthic extracellular polymeric substances (EPS) in intertidal sediments fuel both generalist and specialist EPS-degrading bacteria. Limnology and Oceanography, 58 (4). pp. 1463-1480. DOI https://doi.org/10.4319/lo.2013.58.4.1463

McKew, BA and Dumbrell, AJ and Daud, SD and Hepburn, L and Thorpe, E and Mogensen, L and Whitby, C (2012) Characterization of Geographically Distinct Bacterial Communities Associated with Coral Mucus Produced by Acropora spp. and Porites spp. Applied and Environmental Microbiology, 78 (15). pp. 5229-5237. DOI https://doi.org/10.1128/aem.07764-11

Coulon, Frédéric and Chronopoulou, Panagiota-Myrsini and Fahy, Anne and Païssé, Sandrine and Goñi-Urriza, Marisol and Peperzak, Louis and Acuña Alvarez, Laura and McKew, Boyd A and Brussaard, Corina PD and Underwood, Graham JC and Timmis, Kenneth N and Duran, Robert and McGenity, Terry J (2012) Central Role of Dynamic Tidal Biofilms Dominated by Aerobic Hydrocarbonoclastic Bacteria and Diatoms in the Biodegradation of Hydrocarbons in Coastal Mudflats. Applied and Environmental Microbiology, 78 (10). pp. 3638-3648. DOI https://doi.org/10.1128/aem.00072-12

Pankhurst, Louise J and Whitby, Corinne and Pawlett, Mark and Larcombe, Lee D and McKew, Boyd and Deacon, Lewis J and Morgan, Sarah L and Villa, Raffaella and Drew, Gillian H and Tyrrel, Sean and Pollard, Simon JT and Coulon, Frédéric (2012) Temporal and spatial changes in the microbial bioaerosol communities in green-waste composting. FEMS Microbiology Ecology, 79 (1). pp. 229-239. DOI https://doi.org/10.1111/j.1574-6941.2011.01210.x

McGenity, Terry J and Folwell, Benjamin D and McKew, Boyd A and Sanni, Gbemisola O (2012) Marine crude-oil biodegradation: a central role for interspecies interactions. Aquatic Biosystems, 8 (1). p. 10. DOI https://doi.org/10.1186/2046-9063-8-10

McKew, Boyd A and Taylor, Joe D and McGenity, Terry J and Underwood, Graham JC (2011) Resistance and resilience of benthic biofilm communities from a temperate saltmarsh to desiccation and rewetting. The ISME Journal, 5 (1). pp. 30-41. DOI https://doi.org/10.1038/ismej.2010.91

Sass, Andrea M and McKew, Boyd A and Sass, Henrik and Fichtel, Jörg and Timmis, Kenneth N and McGenity, Terry J (2008) Diversity of Bacillus-like organisms isolated from deep-sea hypersaline anoxic sediments. Saline Systems, 4 (1). 8-. DOI https://doi.org/10.1186/1746-1448-4-8

McKew, Boyd A and Coulon, Frédéric and Yakimov, Michail M and Denaro, Renata and Genovese, Maria and Smith, Cindy J and Osborn, A Mark and Timmis, Kenneth N and McGenity, Terry J (2007) Efficacy of intervention strategies for bioremediation of crude oil in marine systems and effects on indigenous hydrocarbonoclastic bacteria. Environmental Microbiology, 9 (6). pp. 1562-1571. DOI https://doi.org/10.1111/j.1462-2920.2007.01277.x

Hallsworth, John E and Yakimov, Michail M and Golyshin, Peter N and Gillion, Jenny LM and D'Auria, Giuseppe and De Lima Alves, Flavia and La Cono, Violetta and Genovese, Maria and McKew, Boyd A and Hayes, Sandra L and Harris, Gayle and Giuliano, Laura and Timmis, Kenneth N and McGenity, Terry J (2007) Limits of life in MgCl2‐containing environments: chaotropicity defines the window. Environmental Microbiology, 9 (3). pp. 801-813. DOI https://doi.org/10.1111/j.1462-2920.2006.01212.x

McKew, Boyd A and Coulon, Frédéric and Osborn, A Mark and Timmis, Kenneth N and McGenity, Terry J (2007) Determining the identity and roles of oil‐metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. DOI https://doi.org/10.1111/j.1462-2920.2006.01125.x

Coulon, Frédéric and McKew, Boyd A and Osborn, A Mark and McGenity, Terry J and Timmis, Kenneth N (2007) Effects of temperature and biostimulation on oil‐degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. DOI https://doi.org/10.1111/j.1462-2920.2006.01126.x

Book Section

Underwood, Graham JC and Dumbrell, Alex J and McGenity, Terry J and McKew, Boyd A and Whitby, Corinne (2022) The Microbiome of Coastal Sediments. In: The Marine Microbiome. The Microbiomes of Humans, Animals, Plants, and the Environment, 3 . Springer International Publishing, pp. 479-534. ISBN 9783030903824. Official URL: https://doi.org/10.1007/978-3-030-90383-1_12

Smith, CJ and Mckew, BA and Coggan, A and Whitby, C (2016) Primers: Functional Genes for Nitrogen-Cycling Microbes in Oil Reservoirs. In: Hydrocarbon and Lipid Microbiology Protocols. Springer, pp. 207-241. ISBN 978-3-662-50427-7. Official URL: http://dx.doi.org/10.1007/8623_2015_184

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