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Marin, R and Cortez, D and Lamanna, F and Pradeepa, MM and Leushkin, E and Julien, P and Liechti, A and Halbert, J and Brüning, T and Mössinger, K and Trefzer, T and Conrad, C and Kerver, HN and Wade, J and Tschopp, P and Kaessmann, H (2017) Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage. Genome Research, 27 (12). pp. 1974-1987. DOI https://doi.org/10.1101/gr.223727.117
Pradeepa, Madapura M and McKenna, Fionnuala and Taylor, Gillian CA and Bengani, Hemant and Grimes, Graeme R and Wood, Andrew J and Bhatia, Shipra and Bickmore, Wendy A (2017) Psip1/p52 regulates posterior Hoxa genes through activation of lncRNA Hottip. PLOS Genetics, 13 (4). e1006677-e1006677. DOI https://doi.org/10.1371/journal.pgen.1006677
Pradeepa, Madapura M (2017) Causal role of histone acetylations in enhancer function. Transcription, 8 (1). pp. 40-47. DOI https://doi.org/10.1080/21541264.2016.1253529
Pradeepa, Madapura M and Grimes, Graeme R and Kumar, Yatendra and Olley, Gabrielle and Taylor, Gillian CA and Schneider, Robert and Bickmore, Wendy A (2016) Histone H3 globular domain acetylation identifies a new class of enhancers. Nature Genetics, 48 (6). pp. 681-686. DOI https://doi.org/10.1038/ng.3550
Robertson, Kevin A and Hsieh, Wei Yuan and Forster, Thorsten and Blanc, Mathieu and Lu, Hongjin and Crick, Peter J and Yutuc, Eylan and Watterson, Steven and Martin, Kimberly and Griffiths, Samantha J and Enright, Anton J and Yamamoto, Mami and Pradeepa, Madapura M and Lennox, Kimberly A and Behlke, Mark A and Talbot, Simon and Haas, Jürgen and Dölken, Lars and Griffiths, William J and Wang, Yuqin and Angulo, Ana and Ghazal, Peter (2016) An Interferon Regulated MicroRNA Provides Broad Cell-Intrinsic Antiviral Immunity through Multihit Host-Directed Targeting of the Sterol Pathway. PLOS Biology, 14 (3). e1002364-e1002364. DOI https://doi.org/10.1371/journal.pbio.1002364
Illingworth, Robert S and Moffat, Michael and Mann, Abigail R and Read, David and Hunter, Chris J and Pradeepa, Madapura M and Adams, Ian R and Bickmore, Wendy A (2015) The E3 ubiquitin ligase activity of RING1B is not essential for early mouse development. Genes & Development, 29 (18). pp. 1897-1902. DOI https://doi.org/10.1101/gad.268151.115
Pradeepa, Madapura M and Grimes, Graeme R and Taylor, Gillian CA and Sutherland, Heidi G and Bickmore, Wendy A (2014) Psip1/Ledgf p75 restrains<i>Hox</i>gene expression by recruiting both trithorax and polycomb group proteins. Nucleic Acids Research, 42 (14). pp. 9021-9032. DOI https://doi.org/10.1093/nar/gku647
Taylor, Gillian CA and Eskeland, Ragnhild and Hekimoglu-Balkan, Betül and Pradeepa, Madapura M and Bickmore, Wendy A (2013) H4K16 acetylation marks active genes and enhancers of embryonic stem cells, but does not alter chromatin compaction. Genome Research, 23 (12). pp. 2053-2065. DOI https://doi.org/10.1101/gr.155028.113
Pradeepa, Madapura M and Sutherland, Heidi G and Ule, Jernej and Grimes, Graeme R and Bickmore, Wendy A (2012) Psip1/Ledgf p52 Binds Methylated Histone H3K36 and Splicing Factors and Contributes to the Regulation of Alternative Splicing. PLoS Genetics, 8 (5). e1002717-e1002717. DOI https://doi.org/10.1371/journal.pgen.1002717
Pradeepa, Madapura M and Nikhil, Gupta and Hari Kishore, Annavarapu and Bharath, Giriyapura N and Kundu, Tapas K and Rao, Manchanahalli R Satyanarayana (2009) Acetylation of Transition Protein 2 (TP2) by KAT3B (p300) Alters Its DNA Condensation Property and Interaction with Putative Histone Chaperone NPM3. Journal of Biological Chemistry, 284 (43). pp. 29956-29967. DOI https://doi.org/10.1074/jbc.m109.052043
Kolthur-Seetharam, Ullas and Pradeepa, Madapura M and Gupta, Nikhil and Narayanaswamy, Rammohan and Rao, Manchanahalli R Satyanarayana (2009) Spatiotemporal Organization of AT- and GC-rich DNA and Their Association With Transition Proteins TP1 and TP2 in Rat Condensing Spermatids. Journal of Histochemistry & Cytochemistry, 57 (10). pp. 951-962. DOI https://doi.org/10.1369/jhc.2009.953414
Pradeepa, MM and Manjunatha, S and Sathish, V and Agrawal, Shipra and Rao, MRS (2008) Involvement of Importin-4 in the Transport of Transition Protein 2 into the Spermatid Nucleus. Molecular and Cellular Biology, 28 (13). pp. 4331-4341. DOI https://doi.org/10.1128/mcb.00519-07
Pradeepa, MM and Rao, MR (2007) Chromatin remodeling during mammalian spermatogenesis: role of testis specific histone variants and transition proteins. Society of Reproduction and Fertility supplement, 63. pp. 1-10.