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Items where Author is "Harrison, AP"

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Number of items: 29.

Article

Wang, J and Meng, X and Yuan, C and Harrison, AP and Chen, M (2016) 'The roles of cross-talk epigenetic patterns in Arabidopsis thaliana.' Briefings in Functional Genomics, 15 (4). 278 - 287. ISSN 2041-2649

Shanahan, H and Harrison, AP and Tobias May, S (2015) 'Teaching Data Science and Cloud Computing in Low and Middle Income Countries.' Advanced Techniques in Biology & Medicine, 03 (03). ISSN 2379-1764

Corpas, M and Valdivia-Granda, W and Torres, N and Greshake, B and Coletta, A and Knaus, A and Harrison, AP and Cariaso, M and Moran, F and Nielsen, F and Swan, D and Weiss Solís, DY and Krawitz, P and Schacherer, F and Schols, P and Yang, H and Borry, P and Glusman, G and Robinson, PN (2015) 'Crowdsourced direct-to-consumer genomic analysis of a family quartet.' BMC Genomics, 16 (1). ISSN 1471-2164

Bai, Y and Dai, X and Harrison, AP and Chen, M (2015) 'RNA regulatory networks in animals and plants: A long noncoding RNA perspective.' Briefings in Functional Genomics, 14 (2). 91 - 101. ISSN 2041-2649

Yuan, C and Wang, J and Harrison, AP and Meng, X and Chen, D and Chen, M (2014) 'Genome-wide view of natural antisense transcripts in Arabidopsis thaliana.' DNA Research, 22 (3). 233 - 243. ISSN 1340-2838

Musa, IK and Walker, SD and Owen, AM and Harrison, AP (2014) 'Self-service infrastructure container for data intensive application.' Journal of Cloud Computing, 3 (1). ISSN 2192-113X

Shanahan, HP and Owen, AM and Harrison, AP (2014) 'Bioinformatics on the cloud computing platform Azure.' PLoS ONE, 9 (7). ISSN 1932-6203

Chen, D and Fu, LY and Zhang, Z and Li, G and Zhang, H and Jiang, L and Harrison, AP and Shanahan, HP and Klukas, C and Zhang, HY and Ruan, Y and Chen, LL and Chen, M (2014) 'Dissecting the chromatin interactome of microRNA genes.' Nucleic Acids Research, 42 (5). 3028 - 3043. ISSN 0305-1048

Upton, GJG and Harrison, AP (2012) 'Motif effects in Affymetrix GeneChips seriously affect probe intensities.' Nucleic Acids Research, 40 (19). 9705 - 9716. ISSN 0305-1048

Shanahan, HP and Memon, FN and Upton, GJG and Harrison, AP (2012) 'Normalized Affymetrix expression data are biased by G-quadruplex formation.' Nucleic Acids Research, 40 (8). 3307 - 3315. ISSN 0305-1048

Memon, FN and Upton, GJG and Harrison, AP (2010) 'A comparative study of the impact of G-stack probes on various affymetrix genechips of mammalia.' Journal of Nucleic Acids, 2010. ISSN 2090-0201

Upton, GJG and Harrison, AP (2010) 'The detection of blur in Affymetrix GeneChips.' Statistical Applications in Genetics and Molecular Biology, 9 (1). ISSN 1544-6115

Langdon, WB and Upton, GJG and Da Silva Camargo, R and Harrison, AP (2010) 'A survey of spatial defects in Homo Sapiens Affymetrix GeneChips.' IEEE/ACM Transactions on Computational Biology and Bioinformatics, 7 (4). 647 - 653. ISSN 1545-5963

Memon, FN and Owen, AM and Sanchez-Graillet, O and Upton, GJG and Harrison, AP (2010) 'Identifying the impact of G-quadruplexes on Affymetrix 3' arrays using cloud computing.' Journal of integrative bioinformatics, 7 (2). 111 - ?. ISSN 1613-4516

Rowsell, J and da Silva Camargo, R and Langdon, WB and Stalteri, MA and Harrison, AP (2010) 'Uncovering the expression patterns of chimeric transcripts using surveys of affymetrix GeneChips.' Journal of integrative bioinformatics, 7 (3). ISSN 1613-4516

Sanchez-Graillet, O and Stalteri, MA and Rowsell, J and Upton, GJG and Harrison, AP (2010) 'Using surveys of Affymetrix GeneChips to study antisense expression.' Journal of integrative bioinformatics, 7 (2). ISSN 1613-4516

Upton, GJG and Sanchez-Graillet, O and Rowsell, J and Arteaga-Salas, JM and Graham, NS and Stalteri, MA and Memon, FN and May, ST and Harrison, AP (2009) 'On the causes of outliers in Affymetrix GeneChip data.' Briefings in Functional Genomics and Proteomics, 8 (3). 199 - 212. ISSN 1473-9550

Langdon, WB and Upton, GJG and Harrison, AP (2009) 'Probes containing runs of guanines provide insights into the biophysics and bioinformatics of Affymetrix GeneChips.' Briefings in Bioinformatics, 10 (3). 259 - 277. ISSN 1467-5463

Langdon, WB and Harrison, AP (2009) 'Evolving DNA motifs to predict GeneChip probe performance.' Algorithms for Molecular Biology, 4. ISSN 1748-7188

Upton, GJG and Langdon, WB and Harrison, AP (2008) 'G-spots cause incorrect expression measurement in Affymetrix microarrays.' BMC Genomics, 9. ISSN 1471-2164

Langdon, WB and Harrison, AP (2008) 'GP on SPMD parallel graphics hardware for mega bioinformatics data mining.' Soft Computing, 12 (12). 1169 - 1183. ISSN 1432-7643

Harrison, AP and Rowsell, J and Camargo, RDS and Langdon, WB and Stalteri, M and Upton, GJG and Arteaga-Salas, JM (2008) 'The use of Affymetrix GeneChips as a tool for studying alternative forms of RNA.' Biochemical Society Transactions, 36 (3). 511 - 513. ISSN 0300-5127

Arteaga-Salas, JM and Harrison, AP and Upton, GJG (2008) 'Reducing spatial flaws in oligonucleotide arrays by using neighborhood information.' Statistical Applications in Genetics and Molecular Biology, 7 (1). ISSN 1544-6115

Sanchez-Graillet, O and Rowsell, J and Langdon, WB and Stalteri, M and Arteaga-Salas, JM and Upton, GJG and Harrison, AP (2008) 'Widespread existence of uncorrelated probe intensities from within the same probeset on Affymetrix GeneChips.' Journal of integrative bioinformatics, 5 (2). ISSN 1613-4516

Arteaga-Salas, JM and Zuzan, H and Langdon, WB and Upton, GJG and Harrison, AP (2008) 'An overview of image-processing methods for affymetrix genechips.' Briefings in Bioinformatics, 9 (1). 25 - 33. ISSN 1467-5463

Harrison, AP and Johnston, CE and Orengo, CA (2007) 'Establishing a major cause of discrepancy in the calibration of Affymetrix GeneChips.' BMC Bioinformatics, 8. ISSN 1471-2105

Stalteri, MA and Harrison, AP (2007) 'Interpretation of multiple probe sets mapping to the same gene in Affymetrix GeneChips.' BMC Bioinformatics, 8. ISSN 1471-2105

Monograph

Langdon, WB and Harrison, AP (2008) CES-483 Evolving Regular Expressions for GeneChip Probe Performance Prediction. UNSPECIFIED. CES-483, University of Essex, Colchester.

Conference or Workshop Item

Langdon, WB and Harrison, AP (2008) Evolving regular expressions for genechip probe performance prediction. In: UNSPECIFIED, ? - ?.

This list was generated on Wed Oct 28 03:36:43 2020 GMT.