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Jones, MA (2019) Retrograde Signalling as an Informant of Circadian Timing. New Phytologist, 221 (4). pp. 1749-1753. DOI https://doi.org/10.1111/nph.15525
Jones, Matthew and Morohashi, Kengo and Grotewold, Erich and Harmer, Stacey Lynn (2019) Arabidopsis JMJD5/JMJ30 Acts Independently of LUX ARRHYTHMO Within the Plant Circadian Clock to Enable Temperature Compensation. Frontiers in Plant Science, 10 (57). 57-. DOI https://doi.org/10.3389/fpls.2019.00057
Jones, Matthew A (2018) Using Light to Improve Commercial Value. Horticulture Research, 5 (1). 47-. DOI https://doi.org/10.1038/s41438-018-0049-7
Litthauer, Suzanne and Jones, Matthew A (2018) SAL1-PAP retrograde signalling extends circadian period by reproducing the loss of exoribonuclease (XRN) activity. Plant Signaling and Behavior, 13 (8). e1500066-. DOI https://doi.org/10.1080/15592324.2018.1500066
Litthauer, Suzanne and Chan, Kai Xun and Jones, Matthew Alan (2018) 3'-Phosphoadenosine 5'-Phosphate Accumulation Delays the Circadian System. Plant Physiology, 176 (4). pp. 3120-3135. DOI https://doi.org/10.1104/pp.17.01611
Malpas, Kathryn Rebecca and Jones, Matthew Alan (2016) Natural Variation of Circadian Rhythms in Kalanchoe Species. Haseltonia, 22 (22). pp. 35-42. DOI https://doi.org/10.2985/026.022.0107
Litthauer, S and Battle, MW and Jones, MA (2016) Phototropins do not alter accumulation of evening-phased circadian transcripts under blue light. Plant signaling & behavior, 11 (2). creators-Jones=3AMatthew_A=3A=3A. DOI https://doi.org/10.1080/15592324.2015.1126029
Jones, MA and Hu, W and Litthauer, S and Lagarias, JC and Harmer, SL (2015) A constitutively active allele of phytochrome B maintains circadian robustness in the absence of light. Plant Physiology, 169 (1). 814 - 825. DOI https://doi.org/10.1104/pp.15.00782
Litthauer, Suzanne and Battle, Martin W and Lawson, Tracy and Jones, Matthew A (2015) Phototropins maintain robust circadian oscillation of <scp>PSII</scp> operating efficiency under blue light. The Plant Journal, 83 (6). pp. 1034-1045. DOI https://doi.org/10.1111/tpj.12947
Jones, MA and Hu, W and Litthauer, S and Lagarias, JC and Harmer, SL (2015) A Constitutively Active Allele of Phytochrome B Maintains Circadian Robustness in the Absence of Light. Plant Physiology, 169 (1). pp. 814-825. DOI https://doi.org/10.1104/pp.15.00782
Hu, W and Franklin, KA and Sharrock, RA and Jones, MA and Harmer, SL and Lagarias, JC (2013) Unanticipated regulatory roles for Arabidopsis phytochromes revealed by null mutant analysis. Proceedings of the National Academy of Sciences of the United States of America, 110 (4). pp. 1542-1547. DOI https://doi.org/10.1073/pnas.1221738110
Jones, Matthew A and Williams, Brian A and McNicol, Jim and Simpson, Craig G and Brown, John WS and Harmer, Stacey L (2012) Mutation of <i>Arabidopsis SPLICEOSOMAL TIMEKEEPER LOCUS1</i> Causes Circadian Clock Defects. The Plant Cell, 24 (10). pp. 4066-4082. DOI https://doi.org/10.1105/tpc.112.104828
Jones, MA and Harmer, SL (2011) JMJD5 Functions in concert with TOC1 in the arabidopsis circadian system. Plant Signaling & Behavior, 6 (3). pp. 445-448. DOI https://doi.org/10.4161/psb.6.3.14654
Copenhaver, GP and Rawat, R and Takahashi, N and Hsu, PY and Jones, MA and Schwartz, J and Salemi, MR and Phinney, BS and Harmer, SL (2011) REVEILLE8 and PSEUDO-REPONSE REGULATOR5 Form a Negative Feedback Loop within the Arabidopsis Circadian Clock. PLoS Genetics, 7 (3). creators-Jones=3AMatthew_A=3A=3A. DOI https://doi.org/10.1371/journal.pgen.1001350
Jones, MA and Covington, MF and DiTacchio, L and Vollmers, C and Panda, S and Harmer, SL (2010) Jumonji domain protein JMJD5 functions in both the plant and human circadian systems. Proceedings Of The National Academy Of Sciences Of The United States Of America, 107 (50). pp. 21623-21628. DOI https://doi.org/10.1073/pnas.1014204108
Kaiserli, E and Sullivan, S and Jones, MA and Feeney, KA and Christie, JM (2009) Domain Swapping to Assess the Mechanistic Basis of Arabidopsis Phototropin 1 Receptor Kinase Activation and Endocytosis by Blue Light. The Plant Cell, 21 (10). pp. 3226-3244. DOI https://doi.org/10.1105/tpc.109.067876
Jones, MA (2009) Entrainment of the Arabidopsis Circadian Clock. Journal of Plant Biology, 52 (3). pp. 202-209. DOI https://doi.org/10.1007/s12374-009-9030-1
Rawat, R and Schwartz, J and Jones, MA and Sairanen, I and Cheng, Y and Andersson, CR and Zhao, Y and Ljung, K and Harmer, SL (2009) REVEILLE1, a Myb-like transcription factor, integrates the circadian clock and auxin pathways. Proceedings of the National Academy of Sciences, 106 (39). pp. 16883-16888. DOI https://doi.org/10.1073/pnas.0813035106
Sullivan, S and Thomson, CE and Lamont, DJ and Jones, MA and Christie, JM (2008) In Vivo Phosphorylation Site Mapping and Functional Characterization of Arabidopsis Phototropin 1. Molecular Plant, 1 (1). pp. 178-194. DOI https://doi.org/10.1093/mp/ssm017
Jones, MA and Christie, JM (2008) Phototropin Receptor Kinase Activation by Blue Light. Plant Signaling & Behavior, 3 (1). pp. 44-46. DOI https://doi.org/10.4161/psb.3.1.4848
Jones, MA and Feeney, KA and Kelly, SM and Christie, JM (2007) Mutational Analysis of Phototropin 1 Provides Insights into the Mechanism Underlying LOV2 Signal Transmission. Journal of Biological Chemistry, 282 (9). pp. 6405-6414. DOI https://doi.org/10.1074/jbc.m605969200
Book Section
Jones, MA (2018) Interplay of Circadian Rhythms and Light in the Regulation of Photosynthesis-Derived Metabolism. In: Progress in Botany. Springer, pp. 147-171. ISBN 9783319714127. Official URL: http://dx.doi.org/10.1007/124_2017_2