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McKew, Boyd A and Johnson, Richard and Clothier, Lindsay and Skeels, Karl and Ross, Matthew S and Metodiev, Metodi and Frenzel, Max and Gieg, Lisa M and Martin, Jonathan W and Hough, Michael A and Whitby, Corinne (2021) Differential protein expression during growth on model and commercial mixtures of naphthenic acids in Pseudomonas fluorescens Pf‐5. MicrobiologyOpen, 10 (4). e1196-. DOI https://doi.org/10.1002/mbo3.1196

Gregson, Benjamin H and Metodieva, Gergana and Metodiev, Metodi V and Golyshin, Peter N and McKew, Boyd A (2020) Protein expression in the obligate hydrocarbon‐degrading psychrophile Oleispira antarctica RB‐8 during alkane degradation and cold tolerance. Environmental Microbiology, 22 (5). pp. 1870-1883. DOI https://doi.org/10.1111/1462-2920.14956

Gregson, Benjamin H and Metodieva, Gergana and Metodiev, Metodi V and McKew, Boyd A (2019) Differential protein expression during growth on linear versus branched alkanes in the obligate marine hydrocarbon‐degrading bacterium Alcanivorax borkumensis SK2T. Environmental Microbiology, 21 (7). pp. 2347-2359. DOI https://doi.org/10.1111/1462-2920.14620

Gregson, Benjamin H and Metodieva, Gergana and Metodiev, Metodi V and Golyshin, Peter N and McKew, Boyd A (2018) Differential Protein Expression During Growth on Medium Versus Long-Chain Alkanes in the Obligate Marine Hydrocarbon-Degrading Bacterium Thalassolituus oleivorans MIL-1. Frontiers in Microbiology, 9. 3130-. DOI https://doi.org/10.3389/fmicb.2018.03130

Mitchell, MC and Metodieva, G and Metodiev, M and Griffiths, H and Meyer, MT (2017) Pyrenoid loss impairs carbon-concentrating mechanism induction and alters primary metabolism in Chlamydomonas reinhardtii. Journal of Experimental Botany, 68 (14). pp. 3891-3902. DOI https://doi.org/10.1093/jxb/erx121

Harrod, A and Fulton, J and Nguyen, VTM and Periyasamy, M and Ramos-Garcia, L and Lai, C-F and Metodieva, G and de Giorgio, A and Williams, RL and Santos, DB and Gomez, PJ and Lin, M-L and Metodiev, MV and Stebbing, J and Castellano, L and Magnani, L and Coombes, RC and Buluwela, L and Ali, S (2017) Genomic modelling of the ESR1 Y537S mutation for evaluating function and new therapeutic approaches for metastatic breast cancer. Oncogene, 36 (16). pp. 2286-2296. DOI https://doi.org/10.1038/onc.2016.382

Todorova, Krassimira and Metodiev, Metodi V and Metodieva, Gergana and Mincheff, Milcho and Fernández, Nelson and Hayrabedyan, Soren (2017) Micro-RNA-204 Participates in TMPRSS2/ERG Regulation and Androgen Receptor Reprogramming in Prostate Cancer. Hormones and Cancer, 8 (1). pp. 28-48. DOI https://doi.org/10.1007/s12672-016-0279-9

Welbourn, Elizabeth M and Wilson, Michael T and Yusof, Ashril and Metodiev, Metodi V and Cooper, Chris E (2017) The mechanism of formation, structure and physiological relevance of covalent hemoglobin attachment to the erythrocyte membrane. Free Radical Biology and Medicine, 103. pp. 95-106. DOI https://doi.org/10.1016/j.freeradbiomed.2016.12.024

Metodieva, Gergana and Adoki, Samson and Lausen, Berthold and Metodiev, Metodi V (2016) Decreased Usage of Specific Scrib Exons Defines a More Malignant Phenotype of Breast Cancer With Worsened Survival. EBioMedicine, 8. pp. 150-158. DOI https://doi.org/10.1016/j.ebiom.2016.05.009

Ismael, A and Tian, W and Waszczak, N and Wang, X and Cao, Y and Suchkov, D and Bar, E and Metodiev, M and Liang, J and Arkowitz, RA and Stone, DE (2016) Gβ promotes pheromone receptor polarization and yeast chemotropism by inhibiting receptor phosphorylation. Science Signaling, 9 (423). ra38-. DOI https://doi.org/10.1126/scisignal.aad4376

Croner, Roland and Sevim, Müzeyyen and Metodiev, Metodi and Jo, Peter and Ghadimi, Michael and Schellerer, Vera and Brunner, Maximillian and Geppert, Carol and Rau, Tilman and Stürzl, Michael and Naschberger, Elisabeth and Matzel, Klaus and Hohenberger, Werner and Lottspeich, Friedrich and Kellermann, Josef (2016) Identification of Predictive Markers for Response to Neoadjuvant Chemoradiation in Rectal Carcinomas by Proteomic Isotope Coded Protein Label (ICPL) Analysis. International Journal of Molecular Sciences, 17 (2). p. 209. DOI https://doi.org/10.3390/ijms17020209

Todorova, Krassimira and Metodiev, Metodi V and Metodieva, Gergana and Zasheva, Diana and Mincheff, Milcho and Hayrabedyan, Soren (2016) miR‐204 is dysregulated in metastatic prostate cancer in vitro. Molecular Carcinogenesis, 55 (2). pp. 131-147. DOI https://doi.org/10.1002/mc.22263

Hayrabedyan, S and Todorova, K and Jabeen, A and Metodieva, G and Toshkov, S and Metodiev, M and Mincheff, M and Fern�ndez, N (2016) Sertoli cells have a functional NALP3 inflammasome that can modulate autophagy and cytokine production. Scientific Reports, 6 (18896). 18896-. DOI https://doi.org/10.1038/srep18896

Mock, T and Daines, SJ and Geider, RJ and Collins, S and Metodiev, M and Millar, AJ and Moulton, V and Lenton, TM (2015) Bridging the gap between omics and earth system science to better understand how environmental change impacts marine microbes. Global Change Biology, 22 (1). pp. 61-75. DOI https://doi.org/10.1111/gcb.12983

McKew, Boyd A and Metodieva, Gergana and Raines, Christine A and Metodiev, Metodi V and Geider, Richard J (2015) Acclimation of <scp><i>E</i></scp><i>miliania huxleyi</i> (1516) to nutrient limitation involves precise modification of the proteome to scavenge alternative sources of <scp>N</scp> and <scp>P</scp>. Environmental Microbiology, 17 (10). pp. 4050-4062. DOI https://doi.org/10.1111/1462-2920.12957

Croner, Roland S and Stürzl, Michael and Rau, Tilman T and Metodieva, Gergana and Geppert, Carol I and Naschberger, Elisabeth and Lausen, Berthold and Metodiev, Metodi V (2014) Quantitative proteome profiling of lymph node-positive<i>vs</i>. -negative colorectal carcinomas pinpoints MX1 as a marker for lymph node metastasis. International Journal of Cancer, 135 (12). pp. 2878-2886. DOI https://doi.org/10.1002/ijc.28929

Mahmoud, Osama and Harrison, Andrew and Perperoglou, Aris and Gul, Asma and Khan, Zardad and Metodiev, Metodi V and Lausen, Berthold (2014) A feature selection method for classification within functional genomics experiments based on the proportional overlapping score. BMC Bioinformatics, 15 (1). 274-. DOI https://doi.org/10.1186/1471-2105-15-274

Mckew, BA and Lefebvre, SC and Achterberg, EP and Metodieva, G and Raines, CA and Metodiev, MV and Geider, RJ (2013) Plasticity in the proteome of Emiliania huxleyi CCMP 1516 to extremes of light is highly targeted. New Phytologist, 200 (1). pp. 61-73. DOI https://doi.org/10.1111/nph.12352

McKew, Boyd A and Davey, Phillip and Finch, Stewart J and Hopkins, Jason and Lefebvre, Stephane C and Metodiev, Metodi V and Oxborough, Kevin and Raines, Christine A and Lawson, Tracy and Geider, Richard J (2013) The trade‐off between the light‐harvesting and photoprotective functions of fucoxanthin‐chlorophyll proteins dominates light acclimation in <i>Emiliania huxleyi</i> (clone <scp>CCMP</scp> 1516). New Phytologist, 200 (1). pp. 74-85. DOI https://doi.org/10.1111/nph.12373

DeFlorio, Reagan and Brett, Marie-Elena and Waszczak, Nicholas and Apollinari, Elisabetta and Metodiev, Metodi V and Dubrovskyi, Oleksii and Eddington, David and Arkowitz, Robert A and Stone, David E (2013) Gβ phosphorylation is critical for efficient chemotropism in yeast. Journal of Cell Science, 126 (14). pp. 2997-3009. DOI https://doi.org/10.1242/jcs.112797

Metodieva, Gergana and Nogueira-de-Souza, Naiara Correa and Greenwood, Christina and Al-Janabi, Khalid and Leng, Lin and Bucala, Richard and Metodiev, Metodi V (2013) CD74-dependent Deregulation of the Tumor Suppressor Scribble in Human Epithelial and Breast Cancer Cells. Neoplasia, 15 (6). 660-IN21. DOI https://doi.org/10.1593/neo.13464

Parisis, Nikolaos and Metodieva, Gergana and Metodiev, Metodi V (2013) Pseudopodial and β-arrestin-interacting proteomes from migrating breast cancer cells upon PAR2 activation. Journal of Proteomics, 80. pp. 91-106. DOI https://doi.org/10.1016/j.jprot.2012.12.024

Karakikes, Ioannis and Morrison, Ian EG and O'Toole, Peter and Metodieva, Gergana and Navarrete, Cristina V and Gomez, Jesus and Miranda‐Sayago, Jose M and Cherry, Richard J and Metodiev, Metodi and Fernandez, Nelson (2012) Interaction of HLA‐DR and CD74 at the cell surface of antigen‐presenting cells by single particle image analysis. The FASEB Journal, 26 (12). pp. 4886-4896. DOI https://doi.org/10.1096/fj.12-211466

Greenwood, Christina and Metodieva, Gergana and Al-Janabi, Khalid and Lausen, Berthold and Alldridge, Louise and Leng, Lin and Bucala, Richard and Fernandez, Nelson and Metodiev, Metodi V (2012) Stat1 and CD74 overexpression is co-dependent and linked to increased invasion and lymph node metastasis in triple-negative breast cancer. Journal of Proteomics, 75 (10). pp. 3031-3040. DOI https://doi.org/10.1016/j.jprot.2011.11.033

Howard, Thomas P and Fryer, Michael J and Singh, Prashant and Metodiev, Metodi and Lytovchenko, Anna and Obata, Toshihiro and Fernie, Alisdair R and Kruger, Nicholas J and Quick, W Paul and Lloyd, Julie C and Raines, Christine A (2011) Antisense Suppression of the Small Chloroplast Protein CP12 in Tobacco Alters Carbon Partitioning and Severely Restricts Growth. Plant Physiology, 157 (2). pp. 620-631. DOI https://doi.org/10.1104/pp.111.183806

Metodiev, Metodi V (2011) Applications of Nanoscale Liquid Chromatography Coupled to Tandem Mass Spectrometry in Quantitative Studies of Protein Expression, Protein–Protein Interaction, and Protein Phosphorylation. Methods in molecular biology (Clifton, N.J.), 790. pp. 99-113. DOI https://doi.org/10.1007/978-1-61779-319-6_8

Zaichick, Sofia V and Metodiev, Metodi V and Nelson, Scott A and Durbrovskyi, Oleksii and Draper, Edward and Cooper, John A and Stone, David E (2009) The Mating-specific Gα Interacts with a Kinesin-14 and Regulates Pheromone-induced Nuclear Migration in Budding Yeast. Molecular Biology of the Cell, 20 (12). pp. 2820-2830. DOI https://doi.org/10.1091/mbc.e09-01-0069

Metodieva, Gergana and Greenwood, Christina and Alldridge, Louise and Sauven, Paul and Metodiev, Metodi (2009) A peptide‐centric approach to breast cancer biomarker discovery utilizing label‐free multiple reaction monitoring mass spectrometry. PROTEOMICS – Clinical Applications, 3 (1). pp. 78-82. DOI https://doi.org/10.1002/prca.200800072

Krey, Gesa and Frank, Pierre and Shaikly, Valerie and Barrientos, Gabriela and Cordo-Russo, Rosalia and Ringel, Frauke and Moschansky, Petra and Chernukhin, Igor V and Metodiev, Metodi and Fernández, Nelson and Klapp, Burghard F and Arck, Petra C and Blois, Sandra M (2008) In vivo dendritic cell depletion reduces breeding efficiency, affecting implantation and early placental development in mice. Journal of Molecular Medicine, 86 (9). pp. 999-1011. DOI https://doi.org/10.1007/s00109-008-0379-2

Alldridge, Louise and Metodieva, Gergana and Greenwood, Christina and Al-Janabi, Khalid and Thwaites, Laura and Sauven, Paul and Metodiev, Metodi (2008) Proteome Profiling of Breast Tumors by Gel Electrophoresis and Nanoscale Electrospray Ionization Mass Spectrometry. Journal of Proteome Research, 7 (4). pp. 1458-1469. DOI https://doi.org/10.1021/pr7007829

Howard, Thomas P and Metodiev, Metodi and Lloyd, Julie C and Raines, Christine A (2008) Thioredoxin-mediated reversible dissociation of a stromal multiprotein complex in response to changes in light availability. Proceedings of the National Academy of Sciences, 105 (10). pp. 4056-4061. DOI https://doi.org/10.1073/pnas.0710518105

Metodiev, Metodi and Alldridge, Louise (2008) Phosphoproteomics: A possible route to novel biomarkers of breast cancer. PROTEOMICS – Clinical Applications, 2 (2). pp. 181-194. DOI https://doi.org/10.1002/prca.200780011

Matheos, Dina and Metodiev, Metodi and Muller, Eric and Stone, David and Rose, Mark D (2004) Pheromone-induced polarization is dependent on the Fus3p MAPK acting through the formin Bni1p. The Journal of Cell Biology, 165 (1). pp. 99-109. DOI https://doi.org/10.1083/jcb.200309089

Metodiev, Metodi V and Matheos, Dina and Rose, Mark D and Stone, David E (2002) Regulation of MAPK Function by Direct Interaction with the Mating-Specific Gα in Yeast. Science, 296 (5572). pp. 1483-1486. DOI https://doi.org/10.1126/science.1070540

Conference or Workshop Item

Mahmoud, Osama and Harrison, Andrew and Gul, Asma and Khan, Zardad and Metodiev, Metodi V and Lausen, Berthold (2016) Minimizing Redundancy Among Genes Selected Based on the Overlapping Analysis. In: UNSPECIFIED, ? - ?.

Metodiev, Metodi V and Timanova, Anna and Stone, David E (2004) Differential phosphoproteome profiling by affinity capture and tandem matrix‐assisted laser desorption/ionization mass spectrometry. In: UNSPECIFIED, ? - ?, Germany.