Kheniche, A and Salhi, A and Harrison, A and Dowden, JM (2008) A deterministic algorithm for DNA sequence comparison. In: UNSPECIFIED, ? - ?.
Kheniche, A and Salhi, A and Harrison, A and Dowden, JM (2008) A deterministic algorithm for DNA sequence comparison. In: UNSPECIFIED, ? - ?.
Kheniche, A and Salhi, A and Harrison, A and Dowden, JM (2008) A deterministic algorithm for DNA sequence comparison. In: UNSPECIFIED, ? - ?.
Abstract
This paper is concerned with a novel way for measuring similarity between sequences of alphanumeric symbols that can potentially be DNA, RNA or protein sequences. The approach relies on finding one-to-one mappings between the sequences of symbols and a subset of R. Gaps are easily detected. Computational results and a comparison with BLAST are included.
| Item Type: | Conference or Workshop Item (UNSPECIFIED) |
|---|---|
| Additional Information: | Published proceedings: Proceedings of the 2008 International Conference on Bioinformatics and Computational Biology, BIOCOMP 2008 |
| Subjects: | Q Science > QA Mathematics Q Science > QH Natural history > QH426 Genetics |
| Divisions: | Faculty of Science and Health Faculty of Science and Health > Mathematics, Statistics and Actuarial Science, School of |
| SWORD Depositor: | Unnamed user with email elements@essex.ac.uk |
| Depositing User: | Unnamed user with email elements@essex.ac.uk |
| Date Deposited: | 09 Jan 2012 12:47 |
| Last Modified: | 01 Aug 2023 23:14 |
| URI: | http://repository.essex.ac.uk/id/eprint/1819 |