Items where Division is "Faculty of Science and Health > Life Sciences, School of" and Year is 2019

Article

Adams, Hannah R and Krewson, Callie and Vardanega, Jenny E and Fujii, Sotaro and Moreno-Chicano, Tadeo and Sambongi, Yoshihiro and Svistunenko, Dimitri and Paps, Jordi and Andrew, Colin R and Hough, Michael A (2019) One fold, two functions: cytochrome P460 and cytochrome c′-β from the methanotroph Methylococcus capsulatus (Bath). Chemical Science, 10 (10). pp. 3031-3041. DOI https://doi.org/10.1039/c8sc05210g

Adams, Mike and Cemlyn, Ben and Henning, Ian and Parker, Matthew and Harbord, Edmund and Oulton, Ruth (2019) Model for confined Tamm plasmon devices. Journal of the Optical Society of America B, 36 (1). pp. 125-130. DOI https://doi.org/10.1364/josab.36.000125

Al Ssadh, Hassan and Alabdulmonem, Waleed and Fernández, Nelson (2019) The role of cluster of differentiation 74 in cancer and cancer immunomodulation. Scientific Journal of King Faisal University (Basic and Applied Sciences), 20 (1). pp. 99-109.

Alzarhani, A Khuzaim and Clark, Dave R and Underwood, Graham JC and Ford, Hilary and Cotton, TE Anne and Dumbrell, Alexander (2019) Are Drivers of Root-Associated Fungal Community Structure Context Specific? ISME Journal, 13 (5). pp. 1330-1344. DOI https://doi.org/10.1038/s41396-019-0350-y

Archer, Louise C and Sohlström, Esra H and Gallo, Bruno and Jochum, Malte and Woodward, Guy and Kordas, Rebecca L and Rall, Björn C and O'Gorman, Eoin J (2019) Consistent temperature dependence of functional response parameters and their use in predicting population abundance. Journal of Animal Ecology, 88 (11). pp. 1670-1683. DOI https://doi.org/10.1111/1365-2656.13060

Bani, Alessia and Borruso, Luigimaria and Matthews Nicholass, Kirsty J and Bardelli, Tommaso and Polo, Andrea and Pioli, Silvia and Gómez-Brandón, María and Insam, Heribert and Dumbrell, Alex J and Brusetti, Lorenzo (2019) Site-Specific Microbial Decomposer Communities Do Not Imply Faster Decomposition: Results from a Litter Transplantation Experiment. Microorganisms, 7 (9). p. 349. DOI https://doi.org/10.3390/microorganisms7090349

Beale, John H and Bolton, Rachel and Marshall, Stephen A and Beale, Emma V and Carr, Stephen B and Ebrahim, Ali and Moreno-Chicano, Tadeo and Hough, Michael A and Worrall, Jonathan AR and Tews, Ivo and Owen, Robin L (2019) Successful sample preparation for serial crystallography experiments. Journal of Applied Crystallography, 52 (6). pp. 1385-1396. DOI https://doi.org/10.1107/s1600576719013517

Bell, Christopher G and Lowe, Robert and Adams, Peter D and Baccarelli, Andrea A and Beck, Stephan and Bell, Jordana T and Christensen, Brock C and Gladyshev, Vadim N and Heijmans, Bastiaan T and Horvath, Steve and Ideker, Trey and Issa, Jean-Pierre J and Kelsey, Karl T and Marioni, Riccardo E and Reik, Wolf and Relton, Caroline L and Schalkwyk, Leonard C and Teschendorff, Andrew E and Wagner, Wolfgang and Zhang, Kang and Rakyan, Vardhman K (2019) DNA methylation aging clocks: challenges and recommendations. Genome Biology, 20 (1). 249-. DOI https://doi.org/10.1186/s13059-019-1824-y

Bennett, Sophie P and Soriano-Laguna, Manuel J and Bradley, Justin M and Svistunenko, Dimitri A and Richardson, David J and Gates, Andrew J and Le Brun, Nick E (2019) NosL is a dedicated copper chaperone for assembly of the CuZ center of nitrous oxide reductase. Chemical Science, 10 (19). pp. 4985-4993. DOI https://doi.org/10.1039/c9sc01053j

Boatman, Tobias G and Davey, Phillip A and Lawson, Tracy and Geider, Richard J (2019) CO2 modulation of the rates of photosynthesis and light-dependent O2 consumption in Trichodesmium. Journal of Experimental Botany, 70 (2). pp. 589-597. DOI https://doi.org/10.1093/jxb/ery368

Boatman, Tobias G and Geider, Richard J and Oxborough, Kevin (2019) Improving the Accuracy of Single Turnover Active Fluorometry (STAF) for the Estimation of Phytoplankton Primary Productivity (PhytoPP). Frontiers in Marine Science, 6 (JUN). DOI https://doi.org/10.3389/fmars.2019.00319

Botterell, Zara LR and Beaumont, Nicola and Dorrington, Tarquin and Steinke, Michael and Thompson, Richard C and Lindeque, Penelope K (2019) Bioavailability and effects of microplastics on marine zooplankton: A review. Environmental Pollution, 245. pp. 98-110. DOI https://doi.org/10.1016/j.envpol.2018.10.065

Boyd, Ryan A and Cavanagh, Amanda P and Kubien, David S and Cousins, Asaph B (2019) Temperature response of Rubisco kinetics inArabidopsis thaliana: thermal breakpoints and implications for reaction mechanisms. Journal of Experimental Botany, 70 (1). pp. 231-242. DOI https://doi.org/10.1093/jxb/ery355

Bradley, Justin and Svistunenko, Dimitri and Pullin, Jacob and Hill, Natalie and Stuart, Rhona and Palenik, Brian and Wilson, Michael and Hemmings, Andrew and Moore, Geoffrey and Le Brun, Nick (2019) Reaction of O2 with a di-iron protein generates a mixed valent Fe2+/Fe3+ center and peroxide. Proceedings of the National Academy of Sciences, 116 (6). pp. 2058-2067. DOI https://doi.org/10.1073/pnas.1809913116

Bretherton, Laura and Poulton, Alex J and Lawson, Tracy and Balestreri, Cecilia and Schroeder, Declan and Moore, C Mark and Suggett, David J (2019) Day length as a key factor moderating the response of coccolithophore growth to elevated pCO2. Limnology and Oceanography, 64 (3). pp. 1284-1296. DOI https://doi.org/10.1002/lno.11115

Brose, Ulrich and Archambault, Phillippe and Barnes, Andrew D and Bersier, Louis-Felix and Boy, Thomas and Canning-Clode, João and Conti, Erminia and Dias, Marta and Digel, Christoph and Dissanayake, Awantha and Flores, Augusto AV and Fussmann, Katarina and Gauzens, Benoit and Gray, Clare and Häussler, Johanna and Hirt, Myriam R and Jacob, Ute and Jochum, Malte and Kéfi, Sonia and McLaughlin, Orla and MacPherson, Muriel M and Latz, Ellen and Layer-Dobra, Katrin and Legagneux, Pierre and Li, Yuanheng and Madeira, Carolina and Martinez, Neo D and Mendonça, Vanessa and Mulder, Christian and Navarrete, Sergio A and O'Gorman, Eoin J and Ott, David and Paula, José and Perkins, Daniel and Piechnik, Denise and Pokrovsky, Ivan and Raffaelli, David and Rall, Björn C and Rosenbaum, Benjamin and Ryser, Remo and Silva, Ana and Sohlström, Esra H and Sokolova, Natalia and Thompson, Murray SA and Thompson, Ross M and Vermandele, Fanny and Vinagre, Catarina and Wang, Shaopeng and Wefer, Jori M and Williams, Richard J and Wieters, Evie and Woodward, Guy and Iles, Alison C (2019) Predator traits determine food-web architecture across ecosystems. Nature Ecology and Evolution, 3 (6). pp. 919-927. DOI https://doi.org/10.1038/s41559-019-0899-x

Cairns, Stephen D and Taylor, Michelle L (2019) An illustrated key to the species of the genus Narella (Cnidaria, Octocorallia, Primnoidae). ZooKeys, 822 (822). pp. 1-15. DOI https://doi.org/10.3897/zookeys.822.29922

Calero-Muñoz, Nieves and Exposito-Rodriguez, Marino and Collado-Arenal, Aurelio M and Rodríguez-Serrano, María and Laureano-Marín, Ana M and Santamaría, M Estrella and Gotor, Cecilia and Díaz, Isabel and Mullineaux, Philip M and Romero-Puertas, María C and Olmedilla, Adela and Sandalio, Luisa M (2019) Cadmium induces reactive oxygen species-dependent pexophagy in Arabidopsis leaves. Plant, Cell and Environment, 42 (9). pp. 2696-2714. DOI https://doi.org/10.1111/pce.13597

Cemlyn, Benjamin R and Henning, Ian D and Adams, Michael J and Harbord, Edmund and Oulton, Ruth and Korpijarvi, Ville-Markus and Guina, Mircea (2019) Polarization Responses of a Solitary and Optically Injected Vertical Cavity Spin Laser. IEEE Journal of Quantum Electronics, 55 (6). pp. 1-9. DOI https://doi.org/10.1109/jqe.2019.2940041

Chaplin, Amanda K and Chernukhin, Igor and Bechtold, Ulrike (2019) Profiling of advanced glycation end products uncovers abiotic stress-specific target proteins in Arabidopsis. Journal of Experimental Botany, 70 (2). pp. 653-670. DOI https://doi.org/10.1093/jxb/ery389

Chaplin, Amanda K and Chicano, Tadeo Moreno and Hampshire, Bethany V and Wilson, Michael T and Hough, Michael A and Svistunenko, Dimitri A and Worrall, Jonathan AR (2019) An Aromatic Dyad Motif in Dye Decolourising Peroxidases Has Implications for Free Radical Formation and Catalysis. Chemistry – A European Journal, 25 (24). pp. 6141-6153. DOI https://doi.org/10.1002/chem.201806290

Chathoth, Keerthi T and Zabet, Nicolae Radu (2019) Chromatin architecture reorganisation during neuronal cell differentiation in Drosophila genome. Genome Research, 29 (4). pp. 613-625. DOI https://doi.org/10.1101/gr.246710.118

Clarkson, Christopher T and Deeks, Emma A and Samarista, Ralph and Mamayusupova, Hulkar and Zhurkin, Victor B and Teif, Vladimir B (2019) CTCF-dependent chromatin boundaries formed by asymmetric nucleosome arrays with decreased linker length. Nucleic Acids Research, 47 (21). pp. 11181-11196. DOI https://doi.org/10.1093/nar/gkz908

Cloyed, Carl S and Dell, Anthony I and Hayes, Tracie and Kordas, Rebecca L and O'Gorman, Eoin J (2019) Long‐term exposure to higher temperature increases the thermal sensitivity of grazer metabolism and movement. Journal of Animal Ecology, 88 (6). pp. 833-844. DOI https://doi.org/10.1111/1365-2656.12976

Colbeck, I and Sidra, S and Ali, Z and Ahmed, S and Nasir, ZA (2019) Spatial and temporal variations in indoor air quality in Lahore, Pakistan. International Journal of Environmental Science and Technology, 16 (6). pp. 2565-2572. DOI https://doi.org/10.1007/s13762-018-1693-z

Conn, Graeme L and Bavro, Vassiliy N and Davies, Christopher (2019) Editorial: Bacterial Mechanisms of Antibiotic Resistance: A Structural Perspective. Frontiers in Molecular Biosciences, 6. 71-. DOI https://doi.org/10.3389/fmolb.2019.00071

Cooper, CE and Silkstone, GGA and Simons, M and Rajagopal, B and Syrett, N and Shaik, T and Gretton, S and Welbourn, E and Bülow, L and Eriksson, NL and Ronda, L and Mozzarelli, A and Eke, A and Mathe, D and Reeder, BJ (2019) Engineering tyrosine residues into hemoglobin enhances heme reduction, decreases oxidative stress and increases vascular retention of a hemoglobin based blood substitute. Free Radical Biology and Medicine, 134. pp. 106-118. DOI https://doi.org/10.1016/j.freeradbiomed.2018.12.030

Deganutti, Giuseppe and Moro, Stefano and Reynolds, Christopher A (2019) Peeking at G-protein-coupled receptors through the molecular dynamics keyhole. Future Medicinal Chemistry, 11 (6). pp. 599-615. DOI https://doi.org/10.4155/fmc-2018-0393

Ebrahim, Ali and Appleby, Martin V and Axford, Danny and Beale, John and Moreno-Chicano, Tadeo and Sherrell, Darren A and Strange, Richard W and Hough, Michael A and Owen, Robin L (2019) Resolving polymorphs and radiation-driven effects in microcrystals using fixed-target serial synchrotron crystallography. Acta Crystallographica Section D Structural Biology, 75 (2). pp. 151-159. DOI https://doi.org/10.1107/s2059798318010240

Ebrahim, Ali and Moreno-Chicano, Tadeo and Appleby, Martin V and Chaplin, Amanda K and Beale, John H and Sherrell, Darren A and Duyvesteyn, Helen ME and Owada, Shigeki and Tono, Kensuke and Sugimoto, Hiroshi and Strange, Richard W and Worrall, Jonathan AR and Axford, Danny and Owen, Robin L and Hough, Michael A (2019) Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins. IUCrJ, 6 (4). pp. 543-551. DOI https://doi.org/10.1107/s2052252519003956

El Khoury, Louis Y and Gorrie-Stone, Tyler J and Smart, Melissa and Hughes, Amanda and Bao, Yanchun and Andrayas, Alexandria and Burrage, Joe and Hannon, Eilis and Kumari, Meena and Mill, Jonathan and Schalkwyk, Leonard (2019) Systematic under-estimation of the epigenetic clock and age acceleration in older subjects. Genome Biology, 20 (1). 283-. DOI https://doi.org/10.1186/s13059-019-1810-4

Ermakova, Maria and Lopez-Calcagno, Patricia E and Raines, Christine A and Furbank, Robert T and von Caemmerer, Susanne (2019) Overexpression of the Rieske FeS protein of the Cytochrome b 6 f complex increases C4 photosynthesis in Setaria viridis. Communications Biology, 2 (1). 314-. DOI https://doi.org/10.1038/s42003-019-0561-9

Exton, Dan A and Ahmadia, Gabby N and Cullen-Unsworth, Leanne C and Jompa, Jamaluddin and May, Duncan and Rice, Joel and Simonin, Paul W and Unsworth, Richard KF and Smith, David J (2019) Artisanal fish fences pose broad and unexpected threats to the tropical coastal seascape. Nature Communications, 10 (1). 2100-. DOI https://doi.org/10.1038/s41467-019-10051-0

Fachi, José Luís and Felipe, Jaqueline de Souza and Pral, Laís Passariello and da Silva, Bruna Karadi and Corrêa, Renan Oliveira and de Andrade, Mirella Cristiny Pereira and da Fonseca, Denise Morais and Basso, Paulo José and Câmara, Niels Olsen Saraiva and de Sales e Souza, Éricka Lorenna and dos Santos Martins, Flaviano and Guima, Suzana Eiko Sato and Thomas, Andrew Maltez and Setubal, João Carlos and Magalhães, Yuli Thamires and Forti, Fábio Luis and Candreva, Thamiris and Rodrigues, Hosana Gomes and de Jesus, Marcelo Bispo and Consonni, Sílvio Roberto and Farias, Alessandro dos Santos and Varga Weisz, Patrick and Vinolo, Marco Aurélio Ramirez (2019) Butyrate Protects Mice from Clostridium difficile-Induced Colitis through an HIF-1-Dependent Mechanism. Cell Reports, 27 (3). 750-761.e7. DOI https://doi.org/10.1016/j.celrep.2019.03.054

Faralli, Michele and Cockram, James and Ober, Eric and Wall, Shellie and Galle, Alexander and Van Rie, Jeroen and Raines, Christine and Lawson, Tracy (2019) Genotypic, Developmental and Environmental Effects on the Rapidity of gs in Wheat: Impacts on Carbon Gain and Water-Use Efficiency. Frontiers in Plant Science, 10. 492-. DOI https://doi.org/10.3389/fpls.2019.00492

Faralli, Michele and Matthews, Jack and Lawson, Tracy (2019) Exploiting natural variation and genetic manipulation of stomatal conductance for crop improvement. Current Opinion in Plant Biology, 49. pp. 1-7. DOI https://doi.org/10.1016/j.pbi.2019.01.003

Ferguson, JN and Meyer, RC and Edwards, KD and Humphry, M and Brendel, O and Bechtold, U (2019) Accelerated flowering time reduces lifetime water use without penalizing reproductive performance in Arabidopsis. Plant, Cell and Environment, 42 (6). pp. 1847-1867. DOI https://doi.org/10.1111/pce.13527

Ferguson, Robert MW and Garcia-Alcega, Sonia and Coulon, Frederic and Dumbrell, Alex J and Whitby, Corinne and Colbeck, Ian (2019) Bioaerosol Biomonitoring: Sampling Optimisation for Molecular Microbial Ecology. Molecular Ecology Resources, 19 (3). pp. 672-690. DOI https://doi.org/10.1111/1755-0998.13002

Freeman, Samuel L and Kwon, Hanna and Portolano, Nicola and Parkin, Gary and Venkatraman Girija, Umakhanth and Basran, Jaswir and Fielding, Alistair J and Fairall, Louise and Svistunenko, Dimitri A and Moody, Peter CE and Schwabe, John WR and Kyriacou, Charalambos P and Raven, Emma L (2019) Heme binding to human CLOCK affects interactions with the E-box. Proceedings of the National Academy of Sciences, 116 (40). pp. 19911-19916. DOI https://doi.org/10.1073/pnas.1905216116

Gardner, Stephanie G and Camp, Emma F and Smith, David J and Kahlke, Tim and Osman, Eslam O and Gendron, Gilberte and Hume, Benjamin CC and Pogoreutz, Claudia and Voolstra, Christian R and Suggett, David J (2019) Coral microbiome diversity reflects mass coral bleaching susceptibility during the 2016 El Niño heat wave. Ecology and Evolution, 9 (3). pp. 938-956. DOI https://doi.org/10.1002/ece3.4662

George, Hartley CPH and Miles, George and Bemrose, James and White, Amelia and Bond, Matthew N and Cameron, Tom C (2019) Inter-generational effects of CO2-induced stream acidification in the Trinidadian Guppy (Poecilia reticulata). Ecology and Evolution, 9 (22). pp. 12836-12845. DOI https://doi.org/10.1002/ece3.5761

Giotis, Efstathios S and Carnell, George and Young, Erik F and Ghanny, Saleena and Soteropoulos, Patricia and Wang, Lin-Fa and Barclay, Wendy S and Skinner, Michael A and Temperton, Nigel (2019) Entry of the bat influenza H17N10 virus into mammalian cells is enabled by the MHC class II HLA-DR receptor. Nature Microbiology, 4 (12). pp. 2035-2038. DOI https://doi.org/10.1038/s41564-019-0517-3

Giotis, Efstathios S and Montillet, Guillaume and Pain, Bertrand and Skinner, Michael A (2019) Chicken Embryonic-Stem Cells Are Permissive to Poxvirus Recombinant Vaccine Vectors. Genes, 10 (3). p. 237. DOI https://doi.org/10.3390/genes10030237

Giotis, Efstathios S and Skinner, Michael A (2019) Spotlight on avian pathology: fowlpox virus. Avian Pathology, 48 (2). pp. 87-90. DOI https://doi.org/10.1080/03079457.2018.1554893

Gorrie-Stone, TJ and Smart, MC and Saffari, A and Malki, K and Hannon, E and Burrage, J and Mill, J and Kumari, M and Schalkwyk, LC (2019) Bigmelon: tools for analysing large DNA methylation datasets. Bioinformatics, 35 (6). pp. 981-986. DOI https://doi.org/10.1093/bioinformatics/bty713

Gouraguine, Adam and Moranta, Joan and Ruiz-Frau, Ana and Hinz, Hilmar and Reñones, Olga and Ferse, Sebastian CA and Jompa, Jamaluddin and Smith, David J (2019) Citizen science in data and resource-limited areas: A tool to detect long-term ecosystem changes. PLoS ONE, 14 (1). e0210007-e0210007. DOI https://doi.org/10.1371/journal.pone.0210007

Gregson, Benjamin H and Metodieva, Gergana and Metodiev, Metodi V and McKew, Boyd A (2019) Differential protein expression during growth on linear versus branched alkanes in the obligate marine hydrocarbon‐degrading bacterium Alcanivorax borkumensis SK2T. Environmental Microbiology, 21 (7). pp. 2347-2359. DOI https://doi.org/10.1111/1462-2920.14620

Guamán-Guevara, Fabricio and Austin, Heather and Hicks, Natalie and Streeter, Richard and Austin, William EN (2019) Impacts of ocean acidification on intertidal benthic foraminiferal growth and calcification. PLoS ONE, 14 (8). e0220046-e0220046. DOI https://doi.org/10.1371/journal.pone.0220046

Han, Jian and Conway Morris, Simon and Hoyal Cuthill, Jennifer F and Shu, Degan (2019) Sclerite-bearing annelids from the lower Cambrian of South China. Scientific Reports, 9 (1). 4955-. DOI https://doi.org/10.1038/s41598-019-40841-x

Hannon, Eilis and Marzi, Sarah J and Schalkwyk, Leonard S and Mill, Jonathan (2019) Genetic risk variants for brain disorders are enriched in cortical H3K27ac domains. Molecular Brain, 12 (1). 7-. DOI https://doi.org/10.1186/s13041-019-0429-4

Harbord, Edmund and Cemlyn, Ben and Parker, Matthew and Clarke, Edmund and Kennedy, Kenneth and Henning, Ian and Adams, Mike and Oulton, Ruth (2019) Confined Tamm optical states coupled to quantum dots in a photoconductive detector. Applied Physics Letters, 115 (17). p. 171101. DOI https://doi.org/10.1063/1.5121597

Hase, Adrian and Gorrie-Stone, Tyler and Freeman, Paul (2019) Tyrosine intake and cardiovascular responses in a motivated performance situation. Sport, Exercise, and Performance Psychology, 8 (1). pp. 80-92. DOI https://doi.org/10.1037/spy0000144

Hatlen, Andrea and Helmy, Mohab and Marco, Antonio (2019) PopTargs: a database for studying population evolutionary genetics of human microRNA target sites. Database, 2019 (1). DOI https://doi.org/10.1093/database/baz102

Helmy, Mohab and Hatlen, Andrea and Marco, Antonio (2019) The Impact of Population Variation in the Analysis of microRNA Target Sites. Non-Coding RNA, 5 (2). p. 42. DOI https://doi.org/10.3390/ncrna5020042

Hendry, Katharine R and Huvenne, Veerle AI and Robinson, Laura F and Annett, Amber and Badger, Marcus and Jacobel, Allison W and Chin Ng, Hong and Opher, Jacob and Pickering, Rebecca A and Taylor, Michelle L and Bates, Stephanie L and Cooper, Adam and Cushman, Grace G and Goodwin, Claire and Hoy, Shannon and Rowland, George and Samperiz, Ana and Williams, James A and Achterberg, Eric P and Arrowsmith, Carol and Alexander Brearley, J and Henley, Sian F and Krause, Jeffrey W and Leng, Melanie J and Li, Tao and McManus, Jerry F and Meredith, Michael P and Perkins, Rupert and Malcolm S. Woodward, E (2019) The biogeochemical impact of glacial meltwater from Southwest Greenland. Progress in Oceanography, 176. p. 102126. DOI https://doi.org/10.1016/j.pocean.2019.102126

Hoyal Cuthill, Jennifer F and Guttenberg, Nicholas and Ledger, Sophie and Crowther, Robyn and Huertas, Blanca (2019) Deep learning on butterfly phenotypes tests evolution’s oldest mathematical model. Science Advances, 5 (8). eaaw4967-. DOI https://doi.org/10.1126/sciadv.aaw4967

Jabeen, A and Reeder, BJ and Svistunenko, D and Hisaindee, S and Ashraf, S and Al-Zuhair, S and Battah, S (2019) Effect of the Photodynamic Therapy Applications with Potent Microalgae Constituents on Several Types of Tumor. IRBM, 40 (1). pp. 51-61. DOI https://doi.org/10.1016/j.irbm.2018.11.003

Jones, MA (2019) Retrograde Signalling as an Informant of Circadian Timing. New Phytologist, 221 (4). pp. 1749-1753. DOI https://doi.org/10.1111/nph.15525

Jones, Matthew and Morohashi, Kengo and Grotewold, Erich and Harmer, Stacey Lynn (2019) Arabidopsis JMJD5/JMJ30 Acts Independently of LUX ARRHYTHMO Within the Plant Circadian Clock to Enable Temperature Compensation. Frontiers in Plant Science, 10 (57). 57-. DOI https://doi.org/10.3389/fpls.2019.00057

Kazakevych, Juri and Stoyanova, Elena and Liebert, Anke and Varga Weisz, Patrick (2019) Transcriptome analysis identifies a robust gene expression program in the mouse intestinal epithelium on aging. Scientific Reports, 9 (1). 10410-. DOI https://doi.org/10.1038/s41598-019-46966-3

Kim, Sang Yeol and Harvey, Christopher M and Giese, Jonas and Lassowskat, Ines and Singh, Vijayata and Cavanagh, Amanda P and Spalding, Martin H and Finkemeier, Iris and Ort, Donald R and Huber, Steven C (2019) In vivo evidence for a regulatory role of phosphorylation of Arabidopsis Rubisco activase at the Thr78 site. Proceedings of the National Academy of Sciences, 116 (37). pp. 18723-18731. DOI https://doi.org/10.1073/pnas.1812916116

Kratina, Pavel and Watts, Tania J and Green, Dannielle S and Kordas, Rebecca L and O'Gorman, Eoin J (2019) Interactive effects of warming and microplastics on metabolism but not feeding rates of a key freshwater detritivore. Environmental Pollution, 255 (Pt 2). p. 113259. DOI https://doi.org/10.1016/j.envpol.2019.113259

Larke-Mejía, Nasmille L and Crombie, Andrew T and Pratscher, Jennifer and McGenity, Terry J and Murrell, J Colin (2019) Novel Isoprene-Degrading Proteobacteria From Soil and Leaves Identified by Cultivation and Metagenomics Analysis of Stable Isotope Probing Experiments. Frontiers in Microbiology, 10. 2700-. DOI https://doi.org/10.3389/fmicb.2019.02700

Lawson, Tracy and Vialet-Chabrand, Silvère (2019) Speedy stomata, photosynthesis and plant water use efficiency. New Phytologist, 221 (1). pp. 93-98. DOI https://doi.org/10.1111/nph.15330

Leiva Eriksson, Nélida and Reeder, Brandon J and Wilson, Michael T and Bülow, Leif (2019) Sugar beet hemoglobins: reactions with nitric oxide and nitrite reveal differential roles for nitrogen metabolism. Biochemical Journal, 476 (14). pp. 2111-2125. DOI https://doi.org/10.1042/bcj20190154

Lopez-Calcagno, Patricia E and Fisk, Stuart and Brown, Kenny L and Bull, Simon E and South, Paul F and Raines, Christine A (2019) Overexpressing the H-protein of the glycine cleavage system increases biomass yield in glasshouse and field grown transgenic tobacco plants. Plant Biotechnology Journal, 17 (1). pp. 141-151. DOI https://doi.org/10.1111/pbi.12953

Mallm, Jan Philipp and Iskar, Murat and Ishaque, Naveed and Klett, Lara C and Kugler, Sabrina J and Muino, Jose M and Teif, Vladimir B and Poos, Alexandra M and Großmann, Sebastian and Erdel, Fabian and Tavernari, Daniele and Koser, Sandra D and Schumacher, Sabrina and Brors, Benedikt and König, Rainer and Remondini, Daniel and Vingron, Martin and Stilgenbauer, Stephan and Lichter, Peter and Zapatka, Marc and Mertens, Daniel and Rippe, Karsten (2019) Linking aberrant chromatin features in chronic lymphocytic leukemia to transcription factor networks. Molecular Systems Biology, 15 (5). e8339-. DOI https://doi.org/10.15252/msb.20188339

Mansell, Georgina and Gorrie-Stone, Tyler J and Bao, Yanchun and Kumari, Meena and Schalkwyk, Leonard S and Mill, Jonathan and Hannon, Eilis (2019) Guidance for DNA methylation studies: statistical insights from the Illumina EPIC array. BMC Genomics, 20 (1). 366-. DOI https://doi.org/10.1186/s12864-019-5761-7

Marco, Antonio (2019) Comment on “microRNAs in the Same Clusters Evolve to Coordinately Regulate Functionally Related Genes”. Molecular Biology and Evolution, 36 (8). p. 1843. DOI https://doi.org/10.1093/molbev/msz120

Mariatulqabtiah, AR and Majid, NN and Giotis, ES and Omar, AR and Skinner, MA (2019) Inoculation of fowlpox viruses coexpressing avian influenza H5 and chicken IL-15 cytokine gene stimulates diverse host immune responses. Asia-Pacific Journal of Molecular Biology and Biotechnology, 27 (1). pp. 84-94. DOI https://doi.org/10.35118/apjmbb.2019.027.1.09

Marshansky, Vladimir and Hosokawa, Hiroyuki and Merkulova, Maria and Bakulina, Anastasia and Dip, Phat Vinh and Thaker, Youg and Bjargava, Ajay and Tonra, James R and . Ausiello, Dennis A and Grüber, Gerhard (2019) Structural model of a2-subunit N-terminus and its binding interface for Arf-GEF CTH2: Implication for regulation of V-ATPase, CTH2 function and rational drug design. Current Topics in Membranes, 83. pp. 77-106. DOI https://doi.org/10.1016/bs.ctm.2019.01.008

Maček, Irena and Clark, Dave R and Šibanc, Nataša and Moser, Gerald and Vodnik, Dominik and Müller, Christoph and Dumbrell, Alex J (2019) Impacts of long‐term elevated atmospheric CO₂ concentrations on communities of arbuscular mycorrhizal fungi. Molecular Ecology, 28 (14). pp. 3445-3458. DOI https://doi.org/10.1111/mec.15160

McNeil, Helen E and Alav, Ilyas and Corona Torres, Ricardo and Rossiter, Amanda E and Laycock, Eve and Legood, Simon and Kaur, Inderpreet and Davies, Matthew and Wand, Matthew and Webber, Mark A and Bavro, Vassiliy N and Blair, Jessica MA (2019) Identification of binding residues between periplasmic adapter protein (PAP) and RND efflux pumps explains PAP-pump promiscuity and roles in antimicrobial resistance. PLoS Pathogens, 15 (12). e1008101-e1008101. DOI https://doi.org/10.1371/journal.ppat.1008101

Meacham-Hensold, Katherine and Montes, Christopher M and Wu, Jin and Guan, Kaiyu and Fu, Peng and Ainsworth, Elizabeth A and Pederson, Taylor and Moore, Caitlin E and Brown, Kenny Lee and Raines, Christine and Bernacchi, Carl J (2019) High-throughput field phenotyping using hyperspectral reflectance and partial least squares regression (PLSR) reveals genetic modifications to photosynthetic capacity. Remote Sensing of Environment, 231. p. 111176. DOI https://doi.org/10.1016/j.rse.2019.04.029

Mohr, Andrea and Chu, Tianyuan and Brooke, Greg N and Zwacka, Ralf M (2019) MSC.sTRAIL Has Better Efficacy than MSC.FL-TRAIL and in Combination with AKTi Blocks Pro-Metastatic Cytokine Production in Prostate Cancer Cells. Cancers, 11 (4). p. 568. DOI https://doi.org/10.3390/cancers11040568

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Pai, Chen-Chun and Hsu, Kuo-Feng and Durley, Samuel C and Keszthelyi, Andrea and Kearsey, Stephen E and Rallis, Charalampos and Folkes, Lisa K and Deegan, Rachel and Wilkins, Sarah E and Pfister, Sophia X and De León, Nagore and Schofield, Christopher J and Bähler, Jürg and Carr, Antony M and Humphrey, Timothy C (2019) An essential role for dNTP homeostasis following CDK-induced replication stress. Journal of Cell Science, 132 (6). jcs226969-. DOI https://doi.org/10.1242/jcs.226969

Pellicer Martinez, Ma Teresa and Crack, Jason C and Stewart, Melissa Yy and Bradley, Justin M and Svistunenko, Dimitri A and Johnston, Andrew Wb and Cheesman, Myles R and Todd, Jonathan D and Le Brun, Nick E (2019) Mechanisms of iron- and O₂-sensing by the [4Fe-4S] cluster of the global iron regulator RirA. eLife, 8. e47804-. DOI https://doi.org/10.7554/elife.47804

Pennacchi, João Paulo and Carmo-Silva, Elizabete and Andralojc, P John and Lawson, Tracy and Allen, Alexandra M and Raines, Christine A and Parry, Martin AJ (2019) Stability of wheat grain yields over three field seasons in the UK. Food and Energy Security, 8 (2). e00147-. DOI https://doi.org/10.1002/fes3.147

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Pratt, N and Chen, T and Li, T and Wilson, DJ and van de Flierdt, T and Little, SH and Taylor, ML and Robinson, LF and Rogers, AD and Santodomingo, N (2019) Temporal distribution and diversity of cold-water corals in the southwest Indian Ocean over the past 25,000 years. Deep Sea Research Part I: Oceanographic Research Papers, 149. p. 103049. DOI https://doi.org/10.1016/j.dsr.2019.05.009

Rathje, Claudia C and Randle, Suzanne J and Al Rawi, Sara and Skinner, Benjamin M and Nelson, David E and Majumdar, Antara and Johnson, Emma EP and Bacon, Joanne and Vlazaki, Myrto and Affara, Nabeel A and Ellis, Peter J and Laman, Heike (2019) A Conserved Requirement for Fbxo7 During Male Germ Cell Cytoplasmic Remodeling. Frontiers in Physiology, 10. 1278-. DOI https://doi.org/10.3389/fphys.2019.01278

Rathje, Claudia Cattoni and Johnson, Emma Elizabeth Philippa and Drage, Deborah and Patinioti, Christina and Silvestri, Giuseppe and Affara, Nabeel Ahmed and Ialy-Radio, Côme and Cocquet, Julie and Skinner, Benjamin Matthew and Ellis, Peter James Ivor (2019) Differential Sperm Motility Mediates the Sex Ratio Drive Shaping Mouse Sex Chromosome Evolution. Current Biology, 29 (21). pp. 3692-3698. DOI https://doi.org/10.1016/j.cub.2019.09.031

Rodriguez-Lopez, Maria and Gonzalez, Suam and Hillson, Olivia and Tunnacliffe, Edward and Codlin, Sandra and Tallada, Victor and Bahler, Jurg and Rallis, Charalampos (2019) The GATA transcription factor Gaf1 represses tRNA genes, inhibits growth, and extends chronological lifespan downstream of fission yeast TORC1. bioarxiv. DOI https://doi.org/10.1101/700286 (Unpublished)

Saffari, Ayden and Arno, Matt and Nasser, Eric and Ronald, Angelica and Wong, Chloe CY and Schalkwyk, Leonard C and Mill, Jonathan and Dudbridge, Frank and Meaburn, Emma L (2019) RNA sequencing of identical twins discordant for autism reveals blood-based signatures implicating immune and transcriptional dysregulation. Molecular Autism, 10 (1). p. 38. DOI https://doi.org/10.1186/s13229-019-0285-1

Saha, Mahasweta and Berdalet, Elisa and Carotenuto, Ylenia and Fink, Patrick and Harder, Tilmann and John, Uwe and Not, Fabrice and Pohnert, Georg and Potin, Philippe and Selander, Erik and Vyverman, Wim and Wichard, Thomas and Zupo, Valerio and Steinke, Michael (2019) Using chemical language to shape future marine health. Frontiers in Ecology and the Environment, 17 (9). pp. 530-537. DOI https://doi.org/10.1002/fee.2113

Shanahan, Danielle F and Astell–Burt, Thomas and Barber, Elizabeth A and Brymer, Eric and Cox, Daniel TC and Dean, Julie and Depledge, Michael and Fuller, Richard A and Hartig, Terry and Irvine, Katherine N and Jones, Andy and Kikillus, Heidy and Lovell, Rebecca and Mitchell, Richard and Niemelä, Jari and Nieuwenhuijsen, Mark and Pretty, Jules and Townsend, Mardie and van Heezik, Yolanda and Warber, Sara and Gaston, Kevin J (2019) Nature–Based Interventions for Improving Health and Wellbeing: The Purpose, the People and the Outcomes. Sports, 7 (6). p. 141. DOI https://doi.org/10.3390/sports7060141

Simkin, Andrew J and López-Calcagno, Patricia E and Raines, Christine A (2019) Feeding the world: improving photosynthetic efficiency for sustainable crop production. Journal of Experimental Botany, 70 (4). pp. 1119-1140. DOI https://doi.org/10.1093/jxb/ery445

Skinner, Benjamin Matthew and Bacon, Joanne and Rathje, Claudia Cattoni and Larson, Erica Lee and Kopania, Emily Emiko Konishi and Good, Jeffrey Martin and Affara, Nabeel Ahmed and Ellis, Peter James Ivor (2019) Automated Nuclear Cartography Reveals Conserved Sperm Chromosome Territory Localization across 2 Million Years of Mouse Evolution. Genes, 10 (2). p. 109. DOI https://doi.org/10.3390/genes10020109

Skinner, Benjamin Matthew and Rathje, Claudia Cattoni and Bacon, Joanne and Johnson, Emma Elizabeth Philippa and Larson, Erica Lee and Kopania, Emily EK and Good, Jeffrey Martin and Yousafzai, Gullalaii and Affara, Nabeel Ahmed and Ellis, Peter James Ivor (2019) A high-throughput method for unbiased quantitation and categorization of nuclear morphology. Biology of Reproduction, 100 (5). pp. 1250-1260. DOI https://doi.org/10.1093/biolre/ioz013

Ssadh, Hussain Al and Abdulmonem, Waleed Al and Rasheed, Zafar and Madar, Inamul Hasan and Alhoderi, Jamila and Eldeen, Samah K Nasr and Alradhwan, Ali and Alasmael, Noura and Alkhamiss, Abdullah and Fernández, Nelson (2019) Knockdown of CD-74 in the Proliferative and Apoptotic Activity of Breast Cancer Cells. Open Access Macedonian Journal of Medical Sciences, 7 (19). pp. 3169-3176. DOI https://doi.org/10.3889/oamjms.2019.354

Straw, Megan L and Hough, Michael A and Wilson, Michael T and Worrall, Jonathan AR (2019) A histidine residue and a tetranuclear cuprous‐thiolate cluster dominate the copper loading landscape of a copper storage protein from Streptomyces lividans. Chemistry – A European Journal, 25 (45). pp. 10678-10688. DOI https://doi.org/10.1002/chem.201901411

Sturrock, Anna M and Satterthwaite, William H and Cervantes‐Yoshida, Kristina M and Huber, Eric R and Sturrock, Hugh JW and Nusslé, Sébastien and Carlson, Stephanie M (2019) Eight Decades of Hatchery Salmon Releases in the California Central Valley: Factors Influencing Straying and Resilience. Fisheries, 44 (9). pp. 433-444. DOI https://doi.org/10.1002/fsh.10267

Sutherland, William J and Broad, Steven and Butchart, Stuart HM and Clarke, Stewart J and Collins, Alexandra M and Dicks, Lynn V and Doran, Helen and Esmail, Nafeesa and Fleishman, Erica and Frost, Nicola and Gaston, Kevin J and Gibbons, David W and Hughes, Alice C and Jiang, Zhigang and Kelman, Ruth and LeAnstey, Becky and le Roux, Xavier and Lickorish, Fiona A and Monk, Kathryn A and Mortimer, Diana and Pearce-Higgins, James W and Peck, Lloyd S and Pettorelli, Nathalie and Pretty, Jules and Seymour, Colleen L and Spalding, Mark D and Wentworth, Jonathan and Ockendon, Nancy (2019) A Horizon Scan of Emerging Issues for Global Conservation in 2019. Trends in Ecology and Evolution, 34 (1). pp. 83-94. DOI https://doi.org/10.1016/j.tree.2018.11.001

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Book Section

Marshall, Robert L and Bavro, Vassiliy N (2019) Multidrug Resistance. In: Bacterial Resistance to Antibiotics From Molecules to Man. John Wiley & Sons, pp. 201-237. ISBN 9781119940777. Official URL: http://doi.org/10.1002/9781119593522.ch9

Teif, Vladimir B and Clarkson, Christopher T (2019) Nucleosome positioning. In: Encyclopedia of Bioinformatics and Computational Biology (vol 2). Elsevier, pp. 308-317. ISBN 978-0-12-811432-2. Official URL: https://doi.org/10.1016/B978-0-12-809633-8.20242-2

Monograph

Clarkson, Christopher T and Deeks, Emma A and Samarista, Ralph and Mamayusupova, Hulkar and Zhurkin, Victor B and Teif, Vladimir B (2019) CTCF-dependent chromatin boundaries formed by asymmetric nucleosome arrays with decreased linker length. Working Paper. bioRxiv. (Unpublished)

Trampari, Eleftheria and Holden, Emma and Wickham, Gregory and Anuradha, Ravi and Prischi, Filippo and de Oliveira Martins, Leonardo and Savva, George and Bavro, Vassiliy N and Webber, Mark (2019) Antibiotics select for novel pathways of resistance in biofilms. Technical Report. bioRxiv.

Book

McGenity, Terry J (2019) Microbial Communities Utilizing Hydrocarbons and Lipids: Members, Metagenomics and Ecophysiology. Handbook of Hydrocarbon and Lipid Microbiology . Springer International Publishing. ISBN 978-3-030-14784-6. Official URL: https://doi.org/10.1007/978-3-030-14785-3

McGenity, Terry J (2019) Taxonomy, Genomics and Ecophysiology of Hydrocarbon-Degrading Microbes. Handbook of Hydrocarbon and Lipid Microbiology . Springer. ISBN 978-3030147952. Official URL: https://doi.org/10.1007/978-3-030-14796-9

Thesis

Al-Zubaidi, Makarim Atiyah Kadhim (2019) Mechanism of metastasis of triple negative breast cancer. PhD thesis, University of Essex.

Alkheilewi, Mohammad (2019) Characterisation of Androgen Receptor Variants in Breast Cancer and the Development of Thieno[2,3-b] Pyridines as Novel Anti-Cancer Compounds. PhD thesis, University of Essex.

Allison, Sarah (2019) The endangered European native oyster Ostrea edulis (L) and creation of Marine Conservation Zones: a win – win scenario for fisheries and conservation? PhD thesis, University of Essex.

Alqurashi, Mohammed (2019) Investigating the Role of RAP2.12 and GAPDH in Photosynthetic CO2 Fixation to Improve Drought Tolerance. PhD thesis, University of Essex.

Amande, Tivkaa Joseph (2019) Biodegradation of Volatile Hydrocarbons in Estuarine Environments. PhD thesis, University of Essex.

Bond, Matthew Neil (2019) Drivers of eco-evolutionary dynamics in model systems - the role of harvest mortality and intraspecific competition. PhD thesis, University of Essex.

Cronin, Ryan James (2019) The role of p90 ribosomal S6 kinases (RSKs) in Steroid signalling. Masters thesis, University of Essex.

Elbishbishy, Mohab Helmy (2019) Cell Signalling and MicroRNAs: Regulation and Evolution. PhD thesis, University of Essex.

Gorrie-Stone, Tyler James (2019) DNA Methylation: Methods and Analyses. PhD thesis, University of Essex.

Huby, Tom J C (2019) Changes in archaeal and bacterial community composition following entombment in halite crystals. Masters thesis, University of Essex.

Ksatrya, Synthesa Praharani (2019) Development of maritime logistics system to support marine and fisheries integrated centres in small island and boundary areas. Masters thesis, University of Essex.

Lown, Alice Elizabeth (2019) Community ecology and population dynamics of the European native oyster (Ostrea edulis) in Essex, UK: A baseline for the management of the Blackwater, Crouch, Roach and Colne Estuaries Marine Conservation Zone. Doctoral thesis, University of Essex.

Matthews, Jack SA (2019) Stomatal acclimation to dynamic light: implications for photosynthesis and water use efficiency. PhD thesis, University of Essex.

Mehrabadi, Y (2019) Regulation of cytotoxic drug-induced apoptosis by death receptor 5 in human colon cancer cells. PhD thesis, University of Essex.

Michailidi, Maria (2019) The role of the BHLH038 transcription factor in the regulation of osmotic and drought stress responses in Arabidopsis thaliana. Masters thesis, University of Essex.

Moreno-Chicano, Tadeo (2019) Structural characterisation of ligand, redox and catalytic states in haem enzymes using in crystallo spectroscopies and serial crystallography. PhD thesis, University of Essex.

Obomighie, Irabonosi (2019) The Role of Arabidopsis thaliana Clade A1 Heat Shock Transcription Factors in Growth and Development. PhD thesis, University of Essex.

Oyemike, Ifeanyi (2019) Manipulating Guard Cell Anatomy and Physiology Using Biotechnological Approaches to Understanding Impact on Crop Performance. PhD thesis, University of Essex.

Passfield, William (2019) Growth, photophysiology and photosynthesis of two marine diatoms grown under predictable intra-diel light fluctuations. PhD thesis, University of Essex.

Patel, Shivani (2019) The effect of chaotropic magnesium chloride on the growth of microbes. Masters thesis, University of Essex.

Qumsani, Alaa Talal (2019) Role of extended spectrum beta lactamases producing E. coli and Acanthamoeba in urinary tract infections. PhD thesis, University of Essex.

Rees, Eleanor (2019) Characterisation of Androgen Receptor Signalling and Metabolism in Prostate Cancer. Masters thesis, University of Essex.

Saenz Marta, Claudia Isabel (2019) Effect of Crude Oil on Light Attenuation and the Resulting Impacts on Marine Microbial Phototrophs and Heterotrophs. PhD thesis, University of Essex.

Sing Wong, Amy (2019) Functional structure of herbivorous fish communities in the Wakatobi National Park, Southeast Sulawesi. Masters thesis, University of Essex.

Straw, Megan Laura (2019) Storing copper in Streptomyces lividans: structural and biochemical properties of a copper storage protein. PhD thesis, University of Essex.